Gene : Phvul.011G109000 P. vulgaris v2.1
Defline:  (1 of 1) K15341 - DNA cross-link repair 1B protein [EC:3.1.-.-] (DCLRE1B, SNM1B) Genomic Order:  1093
Name:  ? Phvul.011G109000 Secondary Identifier:  ? PAC:37155984
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G109000 0.5kb upstream 0.5kb upstream 3017 true Chr11: 13562264-13565280 Phaseolus vulgaris
Phvul.011G109000 0.5kb upstream 0.5kb upstream 500 false Chr11: 13564781-13565280 Phaseolus vulgaris
Phvul.011G109000 0.5kb downstream 0.5kb downstream 3017 true Chr11: 13561764-13564780 Phaseolus vulgaris
Phvul.011G109000 0.5kb downstream 0.5kb downstream 500 false Chr11: 13561764-13562263 Phaseolus vulgaris
Phvul.011G109000 1.0kb upstream 1.0kb upstream 3517 true Chr11: 13562264-13565780 Phaseolus vulgaris
Phvul.011G109000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13564781-13565780 Phaseolus vulgaris
Phvul.011G109000 1.0kb downstream 1.0kb downstream 3517 true Chr11: 13561264-13564780 Phaseolus vulgaris
Phvul.011G109000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13561264-13562263 Phaseolus vulgaris
Phvul.011G109000 2.0kb upstream 2.0kb upstream 4517 true Chr11: 13562264-13566780 Phaseolus vulgaris
Phvul.011G109000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13564781-13566780 Phaseolus vulgaris
Phvul.011G109000 2.0kb downstream 2.0kb downstream 4517 true Chr11: 13560264-13564780 Phaseolus vulgaris
Phvul.011G109000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13560264-13562263 Phaseolus vulgaris
Phvul.011G109000 5.0kb upstream 5.0kb upstream 7517 true Chr11: 13562264-13569780 Phaseolus vulgaris
Phvul.011G109000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13564781-13569780 Phaseolus vulgaris
Phvul.011G109000 5.0kb downstream 5.0kb downstream 7517 true Chr11: 13557264-13564780 Phaseolus vulgaris
Phvul.011G109000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13557264-13562263 Phaseolus vulgaris
Phvul.011G109000 10.0kb upstream 10.0kb upstream 12517 true Chr11: 13562264-13574780 Phaseolus vulgaris
Phvul.011G109000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13564781-13574780 Phaseolus vulgaris
Phvul.011G109000 10.0kb downstream 10.0kb downstream 12517 true Chr11: 13552264-13564780 Phaseolus vulgaris
Phvul.011G109000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13552264-13562263 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297277 5265 Fabidae View MSA
124073622 5270 Rosid View MSA
123741645 5271 Pentapetalae View MSA
122793173 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.876336 0.0 4.91255    
cufflinks 1.91218 0.0 8.78811   High
cufflinks 0.967728 0.0 4.11702    
cufflinks 0.42122 0.0 2.76941 Low Low
cufflinks 0.85409 0.0 4.83145    
cufflinks 1.47083 0.0 7.25337   High
cufflinks 0.902672 0.0 5.22772    
cufflinks 0.604824 0.0 3.8122    
cufflinks 0.404128 0.0 2.70576 Low Low
cufflinks 0.579016 0.0 3.58503    
cufflinks 1.64213 0.0 7.8252   High

0 Strain