Gene : Phvul.011G106700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10811//PTHR10811:SF19 - FRINGE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1078
Name:  ? Phvul.011G106700 Secondary Identifier:  ? PAC:37156545
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G106700 0.5kb upstream 0.5kb upstream 2771 true Chr11: 12818653-12821423 Phaseolus vulgaris
Phvul.011G106700 0.5kb upstream 0.5kb upstream 500 false Chr11: 12820924-12821423 Phaseolus vulgaris
Phvul.011G106700 0.5kb downstream 0.5kb downstream 2771 true Chr11: 12818153-12820923 Phaseolus vulgaris
Phvul.011G106700 0.5kb downstream 0.5kb downstream 500 false Chr11: 12818153-12818652 Phaseolus vulgaris
Phvul.011G106700 1.0kb upstream 1.0kb upstream 3271 true Chr11: 12818653-12821923 Phaseolus vulgaris
Phvul.011G106700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12820924-12821923 Phaseolus vulgaris
Phvul.011G106700 1.0kb downstream 1.0kb downstream 3271 true Chr11: 12817653-12820923 Phaseolus vulgaris
Phvul.011G106700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12817653-12818652 Phaseolus vulgaris
Phvul.011G106700 2.0kb upstream 2.0kb upstream 4271 true Chr11: 12818653-12822923 Phaseolus vulgaris
Phvul.011G106700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12820924-12822923 Phaseolus vulgaris
Phvul.011G106700 2.0kb downstream 2.0kb downstream 4271 true Chr11: 12816653-12820923 Phaseolus vulgaris
Phvul.011G106700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12816653-12818652 Phaseolus vulgaris
Phvul.011G106700 5.0kb upstream 5.0kb upstream 7271 true Chr11: 12818653-12825923 Phaseolus vulgaris
Phvul.011G106700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12820924-12825923 Phaseolus vulgaris
Phvul.011G106700 5.0kb downstream 5.0kb downstream 7271 true Chr11: 12813653-12820923 Phaseolus vulgaris
Phvul.011G106700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12813653-12818652 Phaseolus vulgaris
Phvul.011G106700 10.0kb upstream 10.0kb upstream 12271 true Chr11: 12818653-12830923 Phaseolus vulgaris
Phvul.011G106700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12820924-12830923 Phaseolus vulgaris
Phvul.011G106700 10.0kb downstream 10.0kb downstream 12271 true Chr11: 12808653-12820923 Phaseolus vulgaris
Phvul.011G106700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12808653-12818652 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302549 5265 Fabidae View MSA
124064758 5270 Rosid View MSA
123742167 5271 Pentapetalae View MSA
122792514 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.45688 0.0 1.69084    
cufflinks 0.972218 0.0 3.35129   High
cufflinks 0.127726 0.0 0.523476 Low Low
cufflinks 0.176283 0.0 0.706751 Low  
cufflinks 0.257399 0.0 1.00299 Low  
cufflinks 0.527382 0.0 1.931 Low  
cufflinks 0.4936 0.0 1.8163 Low  
cufflinks 0.257233 0.0 0.997406 Low  
cufflinks 0.446812 0.0 1.65922 Low  
cufflinks 0.128435 0.0 0.527648 Low Low
cufflinks 0.68957 0.0 2.47203   High

0 Strain