Gene : Phvul.011G091900 P. vulgaris v2.1
Defline:  (1 of 1) K02324 - DNA polymerase epsilon subunit 1 (POLE1) Genomic Order:  923
Name:  ? Phvul.011G091900 Secondary Identifier:  ? PAC:37156061
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G091900 0.5kb upstream 0.5kb upstream 23623 true Chr11: 9059553-9083175 Phaseolus vulgaris
Phvul.011G091900 0.5kb upstream 0.5kb upstream 500 false Chr11: 9059553-9060052 Phaseolus vulgaris
Phvul.011G091900 0.5kb downstream 0.5kb downstream 23623 true Chr11: 9060053-9083675 Phaseolus vulgaris
Phvul.011G091900 0.5kb downstream 0.5kb downstream 500 false Chr11: 9083176-9083675 Phaseolus vulgaris
Phvul.011G091900 1.0kb upstream 1.0kb upstream 24123 true Chr11: 9059053-9083175 Phaseolus vulgaris
Phvul.011G091900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9059053-9060052 Phaseolus vulgaris
Phvul.011G091900 1.0kb downstream 1.0kb downstream 24123 true Chr11: 9060053-9084175 Phaseolus vulgaris
Phvul.011G091900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9083176-9084175 Phaseolus vulgaris
Phvul.011G091900 2.0kb upstream 2.0kb upstream 25123 true Chr11: 9058053-9083175 Phaseolus vulgaris
Phvul.011G091900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9058053-9060052 Phaseolus vulgaris
Phvul.011G091900 2.0kb downstream 2.0kb downstream 25123 true Chr11: 9060053-9085175 Phaseolus vulgaris
Phvul.011G091900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9083176-9085175 Phaseolus vulgaris
Phvul.011G091900 5.0kb upstream 5.0kb upstream 28123 true Chr11: 9055053-9083175 Phaseolus vulgaris
Phvul.011G091900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9055053-9060052 Phaseolus vulgaris
Phvul.011G091900 5.0kb downstream 5.0kb downstream 28123 true Chr11: 9060053-9088175 Phaseolus vulgaris
Phvul.011G091900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9083176-9088175 Phaseolus vulgaris
Phvul.011G091900 10.0kb upstream 10.0kb upstream 33123 true Chr11: 9050053-9083175 Phaseolus vulgaris
Phvul.011G091900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9050053-9060052 Phaseolus vulgaris
Phvul.011G091900 10.0kb downstream 10.0kb downstream 33123 true Chr11: 9060053-9093175 Phaseolus vulgaris
Phvul.011G091900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9083176-9093175 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309265 5265 Fabidae View MSA
124064843 5270 Rosid View MSA
123747038 5271 Pentapetalae View MSA
122788232 5272 Eudicot View MSA
122046610 5273 Angiosperm View MSA
121345888 5274 Embryophyte View MSA
123425547 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.860284 0.0 2.57083   Low
cufflinks 2.91961 0.0 7.77637    
cufflinks 6.24252 0.0 16.1359    
cufflinks 1.07284 0.0 3.16147   Low
cufflinks 4.51301 0.0 11.773    
cufflinks 5.31106 0.0 13.7535    
cufflinks 7.05732 0.0 18.2445    
cufflinks 6.68381 0.0 17.2799    
cufflinks 6.86749 0.0 17.7513    
cufflinks 3.94031 0.0 10.3058    
cufflinks 2.3545 0.0 6.41262    

0 Strain