Gene : Phvul.011G094900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23177:SF20 - RHO GTPASE-ACTIVATING PROTEIN 1-RELATED Genomic Order:  951
Name:  ? Phvul.011G094900 Secondary Identifier:  ? PAC:37154807
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G094900 0.5kb upstream 0.5kb upstream 4356 true Chr11: 9591731-9596086 Phaseolus vulgaris
Phvul.011G094900 0.5kb upstream 0.5kb upstream 500 false Chr11: 9591731-9592230 Phaseolus vulgaris
Phvul.011G094900 0.5kb downstream 0.5kb downstream 4356 true Chr11: 9592231-9596586 Phaseolus vulgaris
Phvul.011G094900 0.5kb downstream 0.5kb downstream 500 false Chr11: 9596087-9596586 Phaseolus vulgaris
Phvul.011G094900 1.0kb upstream 1.0kb upstream 4856 true Chr11: 9591231-9596086 Phaseolus vulgaris
Phvul.011G094900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9591231-9592230 Phaseolus vulgaris
Phvul.011G094900 1.0kb downstream 1.0kb downstream 4856 true Chr11: 9592231-9597086 Phaseolus vulgaris
Phvul.011G094900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9596087-9597086 Phaseolus vulgaris
Phvul.011G094900 2.0kb upstream 2.0kb upstream 5856 true Chr11: 9590231-9596086 Phaseolus vulgaris
Phvul.011G094900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9590231-9592230 Phaseolus vulgaris
Phvul.011G094900 2.0kb downstream 2.0kb downstream 5856 true Chr11: 9592231-9598086 Phaseolus vulgaris
Phvul.011G094900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9596087-9598086 Phaseolus vulgaris
Phvul.011G094900 5.0kb upstream 5.0kb upstream 8856 true Chr11: 9587231-9596086 Phaseolus vulgaris
Phvul.011G094900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9587231-9592230 Phaseolus vulgaris
Phvul.011G094900 5.0kb downstream 5.0kb downstream 8856 true Chr11: 9592231-9601086 Phaseolus vulgaris
Phvul.011G094900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9596087-9601086 Phaseolus vulgaris
Phvul.011G094900 10.0kb upstream 10.0kb upstream 13856 true Chr11: 9582231-9596086 Phaseolus vulgaris
Phvul.011G094900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9582231-9592230 Phaseolus vulgaris
Phvul.011G094900 10.0kb downstream 10.0kb downstream 13856 true Chr11: 9592231-9606086 Phaseolus vulgaris
Phvul.011G094900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9596087-9606086 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306505 5265 Fabidae View MSA
124070990 5270 Rosid View MSA
123748530 5271 Pentapetalae View MSA
122791760 5272 Eudicot View MSA
122045219 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.38298 0.0 4.47026    
cufflinks 3.94867 0.0 11.3429    
cufflinks 4.35196 0.0 12.3559    
cufflinks 3.47822 0.0 10.162    
cufflinks 5.16391 0.0 14.5132    
cufflinks 9.39303 0.0 24.99    
cufflinks 1.67878 0.0 5.29477    
cufflinks 0.827189 0.0 2.82819    
cufflinks 2.74033 0.0 8.18523    
cufflinks 0.0239217 0.0 0.113018 Low Low
cufflinks 8.24826 0.0 22.2172    

0 Strain