Gene : Phvul.011G098800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31086:SF22 - ALUMINUM-ACTIVATED MALATE TRANSPORTER 1-RELATED Genomic Order:  991
Name:  ? Phvul.011G098800 Secondary Identifier:  ? PAC:37156115
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G098800 0.5kb upstream 0.5kb upstream 3355 true Chr11: 10254133-10257487 Phaseolus vulgaris
Phvul.011G098800 0.5kb upstream 0.5kb upstream 500 false Chr11: 10256988-10257487 Phaseolus vulgaris
Phvul.011G098800 0.5kb downstream 0.5kb downstream 3355 true Chr11: 10253633-10256987 Phaseolus vulgaris
Phvul.011G098800 0.5kb downstream 0.5kb downstream 500 false Chr11: 10253633-10254132 Phaseolus vulgaris
Phvul.011G098800 1.0kb upstream 1.0kb upstream 3855 true Chr11: 10254133-10257987 Phaseolus vulgaris
Phvul.011G098800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10256988-10257987 Phaseolus vulgaris
Phvul.011G098800 1.0kb downstream 1.0kb downstream 3855 true Chr11: 10253133-10256987 Phaseolus vulgaris
Phvul.011G098800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10253133-10254132 Phaseolus vulgaris
Phvul.011G098800 2.0kb upstream 2.0kb upstream 4855 true Chr11: 10254133-10258987 Phaseolus vulgaris
Phvul.011G098800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10256988-10258987 Phaseolus vulgaris
Phvul.011G098800 2.0kb downstream 2.0kb downstream 4855 true Chr11: 10252133-10256987 Phaseolus vulgaris
Phvul.011G098800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10252133-10254132 Phaseolus vulgaris
Phvul.011G098800 5.0kb upstream 5.0kb upstream 7855 true Chr11: 10254133-10261987 Phaseolus vulgaris
Phvul.011G098800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10256988-10261987 Phaseolus vulgaris
Phvul.011G098800 5.0kb downstream 5.0kb downstream 7855 true Chr11: 10249133-10256987 Phaseolus vulgaris
Phvul.011G098800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10249133-10254132 Phaseolus vulgaris
Phvul.011G098800 10.0kb upstream 10.0kb upstream 12855 true Chr11: 10254133-10266987 Phaseolus vulgaris
Phvul.011G098800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10256988-10266987 Phaseolus vulgaris
Phvul.011G098800 10.0kb downstream 10.0kb downstream 12855 true Chr11: 10244133-10256987 Phaseolus vulgaris
Phvul.011G098800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10244133-10254132 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307255 5265 Fabidae View MSA
124072660 5270 Rosid View MSA
123751083 5271 Pentapetalae View MSA
122790072 5272 Eudicot View MSA
122050187 5273 Angiosperm View MSA
121311787 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.9052 0.0 8.97946    
cufflinks 1.21435 0.0 4.14638    
cufflinks 0.99734 0.0 3.47864    
cufflinks 1.21309 0.0 4.17442    
cufflinks 5.2179 0.0 15.2121   High
cufflinks 2.28754 0.0 7.27236    
cufflinks 1.37898 0.0 4.64167    
cufflinks 1.44633 0.0 4.81485    
cufflinks 0.522778 0.0 1.94131   Low
cufflinks 5.22447 0.0 15.1218   High
cufflinks 2.71171 0.0 8.50217    

0 Strain