Gene : Phvul.011G098600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR21495//PTHR21495:SF78 - NUCLEOPORIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1027
Name:  ? Phvul.011G098600 Secondary Identifier:  ? PAC:37155261
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G098600 0.5kb upstream 0.5kb upstream 1141 true Chr11: 11239583-11240723 Phaseolus vulgaris
Phvul.011G098600 0.5kb upstream 0.5kb upstream 500 false Chr11: 11240224-11240723 Phaseolus vulgaris
Phvul.011G098600 0.5kb downstream 0.5kb downstream 1141 true Chr11: 11239083-11240223 Phaseolus vulgaris
Phvul.011G098600 0.5kb downstream 0.5kb downstream 500 false Chr11: 11239083-11239582 Phaseolus vulgaris
Phvul.011G098600 1.0kb upstream 1.0kb upstream 1641 true Chr11: 11239583-11241223 Phaseolus vulgaris
Phvul.011G098600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11240224-11241223 Phaseolus vulgaris
Phvul.011G098600 1.0kb downstream 1.0kb downstream 1641 true Chr11: 11238583-11240223 Phaseolus vulgaris
Phvul.011G098600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11238583-11239582 Phaseolus vulgaris
Phvul.011G098600 2.0kb upstream 2.0kb upstream 2641 true Chr11: 11239583-11242223 Phaseolus vulgaris
Phvul.011G098600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11240224-11242223 Phaseolus vulgaris
Phvul.011G098600 2.0kb downstream 2.0kb downstream 2641 true Chr11: 11237583-11240223 Phaseolus vulgaris
Phvul.011G098600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11237583-11239582 Phaseolus vulgaris
Phvul.011G098600 5.0kb upstream 5.0kb upstream 5641 true Chr11: 11239583-11245223 Phaseolus vulgaris
Phvul.011G098600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11240224-11245223 Phaseolus vulgaris
Phvul.011G098600 5.0kb downstream 5.0kb downstream 5641 true Chr11: 11234583-11240223 Phaseolus vulgaris
Phvul.011G098600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11234583-11239582 Phaseolus vulgaris
Phvul.011G098600 10.0kb upstream 10.0kb upstream 10641 true Chr11: 11239583-11250223 Phaseolus vulgaris
Phvul.011G098600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11240224-11250223 Phaseolus vulgaris
Phvul.011G098600 10.0kb downstream 10.0kb downstream 10641 true Chr11: 11229583-11240223 Phaseolus vulgaris
Phvul.011G098600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11229583-11239582 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
122314276 5265 Fabidae View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.45283 0.0 11.9807    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0311815 0.0 0.170096 Low  

0 Strain