Gene : Phvul.011G097500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR33057:SF17 - GB Genomic Order:  979
Name:  ? Phvul.011G097500 Secondary Identifier:  ? PAC:37155975
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G097500 0.5kb upstream 0.5kb upstream 1651 true Chr11: 10015480-10017130 Phaseolus vulgaris
Phvul.011G097500 0.5kb upstream 0.5kb upstream 500 false Chr11: 10016631-10017130 Phaseolus vulgaris
Phvul.011G097500 0.5kb downstream 0.5kb downstream 1651 true Chr11: 10014980-10016630 Phaseolus vulgaris
Phvul.011G097500 0.5kb downstream 0.5kb downstream 500 false Chr11: 10014980-10015479 Phaseolus vulgaris
Phvul.011G097500 1.0kb upstream 1.0kb upstream 2151 true Chr11: 10015480-10017630 Phaseolus vulgaris
Phvul.011G097500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10016631-10017630 Phaseolus vulgaris
Phvul.011G097500 1.0kb downstream 1.0kb downstream 2151 true Chr11: 10014480-10016630 Phaseolus vulgaris
Phvul.011G097500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10014480-10015479 Phaseolus vulgaris
Phvul.011G097500 2.0kb upstream 2.0kb upstream 3151 true Chr11: 10015480-10018630 Phaseolus vulgaris
Phvul.011G097500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10016631-10018630 Phaseolus vulgaris
Phvul.011G097500 2.0kb downstream 2.0kb downstream 3151 true Chr11: 10013480-10016630 Phaseolus vulgaris
Phvul.011G097500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10013480-10015479 Phaseolus vulgaris
Phvul.011G097500 5.0kb upstream 5.0kb upstream 6151 true Chr11: 10015480-10021630 Phaseolus vulgaris
Phvul.011G097500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10016631-10021630 Phaseolus vulgaris
Phvul.011G097500 5.0kb downstream 5.0kb downstream 6151 true Chr11: 10010480-10016630 Phaseolus vulgaris
Phvul.011G097500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10010480-10015479 Phaseolus vulgaris
Phvul.011G097500 10.0kb upstream 10.0kb upstream 11151 true Chr11: 10015480-10026630 Phaseolus vulgaris
Phvul.011G097500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10016631-10026630 Phaseolus vulgaris
Phvul.011G097500 10.0kb downstream 10.0kb downstream 11151 true Chr11: 10005480-10016630 Phaseolus vulgaris
Phvul.011G097500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10005480-10015479 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.01428 0.0 10.1208    
cufflinks 0.635871 0.0 2.46644   Low
cufflinks 6.37041 0.0 19.5757    
cufflinks 9.11282 0.0 26.8271    
cufflinks 5.86106 0.0 18.3013    
cufflinks 8.50766 0.0 25.37    
cufflinks 2.03137 0.0 7.12337    
cufflinks 0.979045 0.0 3.66944    
cufflinks 3.98174 0.0 12.9411    
cufflinks 0.192799 0.0 0.826215 Low Low
cufflinks 9.25138 0.0 27.4414    

0 Strain