Gene : Phvul.011G082600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11353:SF11 - CHAPERONIN 60 SUBUNIT ALPHA 1, CHLOROPLASTIC Genomic Order:  832
Name:  ? Phvul.011G082600 Secondary Identifier:  ? PAC:37155596
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G082600 0.5kb upstream 0.5kb upstream 4111 true Chr11: 7732659-7736769 Phaseolus vulgaris
Phvul.011G082600 0.5kb upstream 0.5kb upstream 500 false Chr11: 7732659-7733158 Phaseolus vulgaris
Phvul.011G082600 0.5kb downstream 0.5kb downstream 4111 true Chr11: 7733159-7737269 Phaseolus vulgaris
Phvul.011G082600 0.5kb downstream 0.5kb downstream 500 false Chr11: 7736770-7737269 Phaseolus vulgaris
Phvul.011G082600 1.0kb upstream 1.0kb upstream 4611 true Chr11: 7732159-7736769 Phaseolus vulgaris
Phvul.011G082600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7732159-7733158 Phaseolus vulgaris
Phvul.011G082600 1.0kb downstream 1.0kb downstream 4611 true Chr11: 7733159-7737769 Phaseolus vulgaris
Phvul.011G082600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7736770-7737769 Phaseolus vulgaris
Phvul.011G082600 2.0kb upstream 2.0kb upstream 5611 true Chr11: 7731159-7736769 Phaseolus vulgaris
Phvul.011G082600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7731159-7733158 Phaseolus vulgaris
Phvul.011G082600 2.0kb downstream 2.0kb downstream 5611 true Chr11: 7733159-7738769 Phaseolus vulgaris
Phvul.011G082600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7736770-7738769 Phaseolus vulgaris
Phvul.011G082600 5.0kb upstream 5.0kb upstream 8611 true Chr11: 7728159-7736769 Phaseolus vulgaris
Phvul.011G082600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7728159-7733158 Phaseolus vulgaris
Phvul.011G082600 5.0kb downstream 5.0kb downstream 8611 true Chr11: 7733159-7741769 Phaseolus vulgaris
Phvul.011G082600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7736770-7741769 Phaseolus vulgaris
Phvul.011G082600 10.0kb upstream 10.0kb upstream 13611 true Chr11: 7723159-7736769 Phaseolus vulgaris
Phvul.011G082600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7723159-7733158 Phaseolus vulgaris
Phvul.011G082600 10.0kb downstream 10.0kb downstream 13611 true Chr11: 7733159-7746769 Phaseolus vulgaris
Phvul.011G082600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7736770-7746769 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301979 5265 Fabidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 125.936 0.0 391.524 High  
cufflinks 224.372 0.0 778.84 High High
cufflinks 228.583 0.0 794.943 High High
cufflinks 174.421 0.0 566.56 High  
cufflinks 100.444 0.0 299.349 High  
cufflinks 237.178 0.0 835.316 High High
cufflinks 44.1592 0.0 120.072 High Low
cufflinks 59.7032 0.0 167.202 High  
cufflinks 54.8599 0.0 152.122 High Low
cufflinks 86.6729 0.0 253.647 High  
cufflinks 65.2421 0.0 184.146 High  

0 Strain