Gene : Phvul.011G086900 P. vulgaris v2.1
Defline:  (1 of 2) K02219 - cyclin-dependent kinase regulatory subunit CKS1 (CKS1) Genomic Order:  873
Name:  ? Phvul.011G086900 Secondary Identifier:  ? PAC:37154639
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G086900 0.5kb upstream 0.5kb upstream 1847 true Chr11: 8282592-8284438 Phaseolus vulgaris
Phvul.011G086900 0.5kb upstream 0.5kb upstream 500 false Chr11: 8283939-8284438 Phaseolus vulgaris
Phvul.011G086900 0.5kb downstream 0.5kb downstream 1847 true Chr11: 8282092-8283938 Phaseolus vulgaris
Phvul.011G086900 0.5kb downstream 0.5kb downstream 500 false Chr11: 8282092-8282591 Phaseolus vulgaris
Phvul.011G086900 1.0kb upstream 1.0kb upstream 2347 true Chr11: 8282592-8284938 Phaseolus vulgaris
Phvul.011G086900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8283939-8284938 Phaseolus vulgaris
Phvul.011G086900 1.0kb downstream 1.0kb downstream 2347 true Chr11: 8281592-8283938 Phaseolus vulgaris
Phvul.011G086900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8281592-8282591 Phaseolus vulgaris
Phvul.011G086900 2.0kb upstream 2.0kb upstream 3347 true Chr11: 8282592-8285938 Phaseolus vulgaris
Phvul.011G086900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8283939-8285938 Phaseolus vulgaris
Phvul.011G086900 2.0kb downstream 2.0kb downstream 3347 true Chr11: 8280592-8283938 Phaseolus vulgaris
Phvul.011G086900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8280592-8282591 Phaseolus vulgaris
Phvul.011G086900 5.0kb upstream 5.0kb upstream 6347 true Chr11: 8282592-8288938 Phaseolus vulgaris
Phvul.011G086900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8283939-8288938 Phaseolus vulgaris
Phvul.011G086900 5.0kb downstream 5.0kb downstream 6347 true Chr11: 8277592-8283938 Phaseolus vulgaris
Phvul.011G086900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8277592-8282591 Phaseolus vulgaris
Phvul.011G086900 10.0kb upstream 10.0kb upstream 11347 true Chr11: 8282592-8293938 Phaseolus vulgaris
Phvul.011G086900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8283939-8293938 Phaseolus vulgaris
Phvul.011G086900 10.0kb downstream 10.0kb downstream 11347 true Chr11: 8272592-8283938 Phaseolus vulgaris
Phvul.011G086900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8272592-8282591 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304336 5265 Fabidae View MSA
124061080 5270 Rosid View MSA
123739192 5271 Pentapetalae View MSA
122791805 5272 Eudicot View MSA
122049124 5273 Angiosperm View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.2701 0.0 220.82 High High
cufflinks 86.3164 0.0 223.383 High High
cufflinks 40.1113 0.0 107.92 High Low
cufflinks 81.868 0.0 212.116 High High
cufflinks 64.5042 0.0 168.775 High  
cufflinks 68.3313 0.0 177.89 High  
cufflinks 63.8348 0.0 166.375 High  
cufflinks 54.917 0.0 144.075 High  
cufflinks 59.5117 0.0 155.649 High  
cufflinks 41.2472 0.0 110.916 High Low
cufflinks 57.2627 0.0 150.596 High  

0 Strain