Gene : Phvul.011G088000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13258:SF0 - COILED-COIL DOMAIN-CONTAINING PROTEIN 132 Genomic Order:  884
Name:  ? Phvul.011G088000 Secondary Identifier:  ? PAC:37156487
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G088000 0.5kb upstream 0.5kb upstream 24624 true Chr11: 8416730-8441353 Phaseolus vulgaris
Phvul.011G088000 0.5kb upstream 0.5kb upstream 500 false Chr11: 8440854-8441353 Phaseolus vulgaris
Phvul.011G088000 0.5kb downstream 0.5kb downstream 24624 true Chr11: 8416230-8440853 Phaseolus vulgaris
Phvul.011G088000 0.5kb downstream 0.5kb downstream 500 false Chr11: 8416230-8416729 Phaseolus vulgaris
Phvul.011G088000 1.0kb upstream 1.0kb upstream 25124 true Chr11: 8416730-8441853 Phaseolus vulgaris
Phvul.011G088000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8440854-8441853 Phaseolus vulgaris
Phvul.011G088000 1.0kb downstream 1.0kb downstream 25124 true Chr11: 8415730-8440853 Phaseolus vulgaris
Phvul.011G088000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8415730-8416729 Phaseolus vulgaris
Phvul.011G088000 2.0kb upstream 2.0kb upstream 26124 true Chr11: 8416730-8442853 Phaseolus vulgaris
Phvul.011G088000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8440854-8442853 Phaseolus vulgaris
Phvul.011G088000 2.0kb downstream 2.0kb downstream 26124 true Chr11: 8414730-8440853 Phaseolus vulgaris
Phvul.011G088000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8414730-8416729 Phaseolus vulgaris
Phvul.011G088000 5.0kb upstream 5.0kb upstream 29124 true Chr11: 8416730-8445853 Phaseolus vulgaris
Phvul.011G088000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8440854-8445853 Phaseolus vulgaris
Phvul.011G088000 5.0kb downstream 5.0kb downstream 29124 true Chr11: 8411730-8440853 Phaseolus vulgaris
Phvul.011G088000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8411730-8416729 Phaseolus vulgaris
Phvul.011G088000 10.0kb upstream 10.0kb upstream 34124 true Chr11: 8416730-8450853 Phaseolus vulgaris
Phvul.011G088000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8440854-8450853 Phaseolus vulgaris
Phvul.011G088000 10.0kb downstream 10.0kb downstream 34124 true Chr11: 8406730-8440853 Phaseolus vulgaris
Phvul.011G088000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8406730-8416729 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304203 5265 Fabidae View MSA
124064722 5270 Rosid View MSA
123746708 5271 Pentapetalae View MSA
122787335 5272 Eudicot View MSA
122045793 5273 Angiosperm View MSA
121345284 5274 Embryophyte View MSA
123426551 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.12542 0.0 14.4827   Low
cufflinks 9.07969 0.0 25.5    
cufflinks 14.6785 0.0 47.1649    
cufflinks 7.61314 0.0 24.831    
cufflinks 13.6218 0.0 43.4835    
cufflinks 13.8909 0.0 44.4331    
cufflinks 12.5449 0.0 40.1303    
cufflinks 13.2615 0.0 37.7746    
cufflinks 13.9225 0.0 39.4756    
cufflinks 17.7999 0.0 57.7605   High
cufflinks 11.9963 0.0 38.507    

0 Strain