Gene : Phvul.011G088200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22891:SF40 - PROTEIN ARGONAUTE 5 Genomic Order:  886
Name:  ? Phvul.011G088200 Secondary Identifier:  ? PAC:37155017
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G088200 0.5kb upstream 0.5kb upstream 6392 true Chr11: 8487240-8493631 Phaseolus vulgaris
Phvul.011G088200 0.5kb upstream 0.5kb upstream 500 false Chr11: 8487240-8487739 Phaseolus vulgaris
Phvul.011G088200 0.5kb downstream 0.5kb downstream 6392 true Chr11: 8487740-8494131 Phaseolus vulgaris
Phvul.011G088200 0.5kb downstream 0.5kb downstream 500 false Chr11: 8493632-8494131 Phaseolus vulgaris
Phvul.011G088200 1.0kb upstream 1.0kb upstream 6892 true Chr11: 8486740-8493631 Phaseolus vulgaris
Phvul.011G088200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8486740-8487739 Phaseolus vulgaris
Phvul.011G088200 1.0kb downstream 1.0kb downstream 6892 true Chr11: 8487740-8494631 Phaseolus vulgaris
Phvul.011G088200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8493632-8494631 Phaseolus vulgaris
Phvul.011G088200 2.0kb upstream 2.0kb upstream 7892 true Chr11: 8485740-8493631 Phaseolus vulgaris
Phvul.011G088200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8485740-8487739 Phaseolus vulgaris
Phvul.011G088200 2.0kb downstream 2.0kb downstream 7892 true Chr11: 8487740-8495631 Phaseolus vulgaris
Phvul.011G088200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8493632-8495631 Phaseolus vulgaris
Phvul.011G088200 5.0kb upstream 5.0kb upstream 10892 true Chr11: 8482740-8493631 Phaseolus vulgaris
Phvul.011G088200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8482740-8487739 Phaseolus vulgaris
Phvul.011G088200 5.0kb downstream 5.0kb downstream 10892 true Chr11: 8487740-8498631 Phaseolus vulgaris
Phvul.011G088200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8493632-8498631 Phaseolus vulgaris
Phvul.011G088200 10.0kb upstream 10.0kb upstream 15892 true Chr11: 8477740-8493631 Phaseolus vulgaris
Phvul.011G088200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8477740-8487739 Phaseolus vulgaris
Phvul.011G088200 10.0kb downstream 10.0kb downstream 15892 true Chr11: 8487740-8503631 Phaseolus vulgaris
Phvul.011G088200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8493632-8503631 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029598 5273 Angiosperm View MSA
122304908 5265 Fabidae View MSA
124068081 5270 Rosid View MSA
123740580 5271 Pentapetalae View MSA
122786970 5272 Eudicot View MSA
121350103 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.09731 0.0 11.1966   Low
cufflinks 13.5209 0.0 34.9543    
cufflinks 5.02829 0.0 13.5287   Low
cufflinks 11.4287 0.0 29.559    
cufflinks 7.94503 0.0 20.7663    
cufflinks 12.9606 0.0 33.5008    
cufflinks 25.6561 0.0 68.0139    
cufflinks 71.1428 0.0 209.959 High High
cufflinks 13.1642 0.0 34.0287    
cufflinks 13.6977 0.0 35.4177    
cufflinks 10.752 0.0 27.8304    

0 Strain