Gene : Phvul.L002032 P. vulgaris v2.1
Defline:  (1 of 2) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Genomic Order:  5
Name:  ? Phvul.L002032 Secondary Identifier:  ? PAC:37148524
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L002032 0.5kb upstream 0.5kb upstream 3313 true scaffold_12: 452859-456171 Phaseolus vulgaris
Phvul.L002032 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 452859-453358 Phaseolus vulgaris
Phvul.L002032 0.5kb downstream 0.5kb downstream 3313 true scaffold_12: 453359-456671 Phaseolus vulgaris
Phvul.L002032 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 456172-456671 Phaseolus vulgaris
Phvul.L002032 1.0kb upstream 1.0kb upstream 3813 true scaffold_12: 452359-456171 Phaseolus vulgaris
Phvul.L002032 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 452359-453358 Phaseolus vulgaris
Phvul.L002032 1.0kb downstream 1.0kb downstream 3813 true scaffold_12: 453359-457171 Phaseolus vulgaris
Phvul.L002032 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 456172-457171 Phaseolus vulgaris
Phvul.L002032 2.0kb upstream 2.0kb upstream 4813 true scaffold_12: 451359-456171 Phaseolus vulgaris
Phvul.L002032 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 451359-453358 Phaseolus vulgaris
Phvul.L002032 2.0kb downstream 2.0kb downstream 4813 true scaffold_12: 453359-458171 Phaseolus vulgaris
Phvul.L002032 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 456172-458171 Phaseolus vulgaris
Phvul.L002032 5.0kb upstream 5.0kb upstream 7813 true scaffold_12: 448359-456171 Phaseolus vulgaris
Phvul.L002032 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 448359-453358 Phaseolus vulgaris
Phvul.L002032 5.0kb downstream 5.0kb downstream 7813 true scaffold_12: 453359-461171 Phaseolus vulgaris
Phvul.L002032 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 456172-461171 Phaseolus vulgaris
Phvul.L002032 10.0kb upstream 10.0kb upstream 12813 true scaffold_12: 443359-456171 Phaseolus vulgaris
Phvul.L002032 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 443359-453358 Phaseolus vulgaris
Phvul.L002032 10.0kb downstream 10.0kb downstream 12813 true scaffold_12: 453359-466171 Phaseolus vulgaris
Phvul.L002032 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 456172-466171 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299193 5265 Fabidae View MSA
124064733 5270 Rosid View MSA
123739884 5271 Pentapetalae View MSA
122786774 5272 Eudicot View MSA
122047801 5273 Angiosperm View MSA
121348083 5274 Embryophyte View MSA
123380723 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.78195 0.0 24.6994    
cufflinks 7.35018 0.0 21.0601    
cufflinks 52.0607 0.0 135.206 High High
cufflinks 8.3737 0.0 23.7353    
cufflinks 12.4468 0.0 34.1661    
cufflinks 19.078 0.0 50.3736    
cufflinks 4.70542 0.0 14.1683   Low
cufflinks 5.61643 0.0 16.5433    
cufflinks 4.28807 0.0 13.0893   Low
cufflinks 15.0201 0.0 40.4364    
cufflinks 8.43878 0.0 23.9587    

0 Strain