Gene : Phvul.L002232 P. vulgaris v2.1
Defline:  (1 of 17) PF14365 - Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  7
Name:  ? Phvul.L002232 Secondary Identifier:  ? PAC:37148522
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L002232 0.5kb upstream 0.5kb upstream 5298 true scaffold_12: 524853-530150 Phaseolus vulgaris
Phvul.L002232 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 529651-530150 Phaseolus vulgaris
Phvul.L002232 0.5kb downstream 0.5kb downstream 5298 true scaffold_12: 524353-529650 Phaseolus vulgaris
Phvul.L002232 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 524353-524852 Phaseolus vulgaris
Phvul.L002232 1.0kb upstream 1.0kb upstream 5798 true scaffold_12: 524853-530650 Phaseolus vulgaris
Phvul.L002232 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 529651-530650 Phaseolus vulgaris
Phvul.L002232 1.0kb downstream 1.0kb downstream 5798 true scaffold_12: 523853-529650 Phaseolus vulgaris
Phvul.L002232 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 523853-524852 Phaseolus vulgaris
Phvul.L002232 2.0kb upstream 2.0kb upstream 6798 true scaffold_12: 524853-531650 Phaseolus vulgaris
Phvul.L002232 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 529651-531650 Phaseolus vulgaris
Phvul.L002232 2.0kb downstream 2.0kb downstream 6798 true scaffold_12: 522853-529650 Phaseolus vulgaris
Phvul.L002232 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 522853-524852 Phaseolus vulgaris
Phvul.L002232 5.0kb upstream 5.0kb upstream 9798 true scaffold_12: 524853-534650 Phaseolus vulgaris
Phvul.L002232 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 529651-534650 Phaseolus vulgaris
Phvul.L002232 5.0kb downstream 5.0kb downstream 9798 true scaffold_12: 519853-529650 Phaseolus vulgaris
Phvul.L002232 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 519853-524852 Phaseolus vulgaris
Phvul.L002232 10.0kb upstream 10.0kb upstream 14798 true scaffold_12: 524853-539650 Phaseolus vulgaris
Phvul.L002232 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 529651-539650 Phaseolus vulgaris
Phvul.L002232 10.0kb downstream 10.0kb downstream 14798 true scaffold_12: 514853-529650 Phaseolus vulgaris
Phvul.L002232 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 514853-524852 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304350 5265 Fabidae View MSA
124062143 5270 Rosid View MSA
123739520 5271 Pentapetalae View MSA
122793543 5272 Eudicot View MSA
122048066 5273 Angiosperm View MSA
121349991 5274 Embryophyte View MSA
123381532 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.02724 0.0 3.36899    
cufflinks 1.44824 0.0 4.56321    
cufflinks 5.34407 0.0 14.66    
cufflinks 3.76154 0.0 10.7289    
cufflinks 5.2087 0.0 14.3895    
cufflinks 5.78522 0.0 15.7465    
cufflinks 4.98352 0.0 13.693    
cufflinks 34.7839 0.0 92.3979 High High
cufflinks 5.2207 0.0 14.3004    
cufflinks 0.120959 0.0 0.484191 Low Low
cufflinks 5.55282 0.0 15.2221    

0 Strain