Gene : Phvul.L001608 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33650:SF1 - CEMA-LIKE PROTON EXTRUSION PROTEIN-LIKE PROTEIN Genomic Order:  1
Name:  ? Phvul.L001608 Secondary Identifier:  ? PAC:37144320
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001608 0.5kb upstream 0.5kb upstream 3250 true scaffold_1092: 52-3301 Phaseolus vulgaris
Phvul.L001608 0.5kb upstream 0.5kb upstream 500 false scaffold_1092: 2802-3301 Phaseolus vulgaris
Phvul.L001608 0.5kb downstream 0.5kb downstream 2801 true scaffold_1092: 1-2801 Phaseolus vulgaris
Phvul.L001608 0.5kb downstream 0.5kb downstream 51 false scaffold_1092: 1-51 Phaseolus vulgaris
Phvul.L001608 1.0kb upstream 1.0kb upstream 3445 true scaffold_1092: 52-3496 Phaseolus vulgaris
Phvul.L001608 1.0kb upstream 1.0kb upstream 695 false scaffold_1092: 2802-3496 Phaseolus vulgaris
Phvul.L001608 1.0kb downstream 1.0kb downstream 2801 true scaffold_1092: 1-2801 Phaseolus vulgaris
Phvul.L001608 1.0kb downstream 1.0kb downstream 51 false scaffold_1092: 1-51 Phaseolus vulgaris
Phvul.L001608 2.0kb upstream 2.0kb upstream 3445 true scaffold_1092: 52-3496 Phaseolus vulgaris
Phvul.L001608 2.0kb upstream 2.0kb upstream 695 false scaffold_1092: 2802-3496 Phaseolus vulgaris
Phvul.L001608 2.0kb downstream 2.0kb downstream 2801 true scaffold_1092: 1-2801 Phaseolus vulgaris
Phvul.L001608 2.0kb downstream 2.0kb downstream 51 false scaffold_1092: 1-51 Phaseolus vulgaris
Phvul.L001608 5.0kb upstream 5.0kb upstream 3445 true scaffold_1092: 52-3496 Phaseolus vulgaris
Phvul.L001608 5.0kb upstream 5.0kb upstream 695 false scaffold_1092: 2802-3496 Phaseolus vulgaris
Phvul.L001608 5.0kb downstream 5.0kb downstream 2801 true scaffold_1092: 1-2801 Phaseolus vulgaris
Phvul.L001608 5.0kb downstream 5.0kb downstream 51 false scaffold_1092: 1-51 Phaseolus vulgaris
Phvul.L001608 10.0kb upstream 10.0kb upstream 3445 true scaffold_1092: 52-3496 Phaseolus vulgaris
Phvul.L001608 10.0kb upstream 10.0kb upstream 695 false scaffold_1092: 2802-3496 Phaseolus vulgaris
Phvul.L001608 10.0kb downstream 10.0kb downstream 2801 true scaffold_1092: 1-2801 Phaseolus vulgaris
Phvul.L001608 10.0kb downstream 10.0kb downstream 51 false scaffold_1092: 1-51 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253304 5265 Fabidae Singleton cluster - no MSA
124066882 5270 Rosid View MSA
123744226 5271 Pentapetalae View MSA
122786508 5272 Eudicot View MSA
122044615 5273 Angiosperm View MSA
121350431 5274 Embryophyte View MSA
123427516 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.5745 0.0 27.186    
cufflinks 10.5207 0.0 29.5688    
cufflinks 39.453 0.0 102.093 High High
cufflinks 14.3215 0.0 39.6025    
cufflinks 10.5211 0.0 29.7417    
cufflinks 23.6357 0.0 62.2294   High
cufflinks 1.57675 0.0 5.4601   Low
cufflinks 1.60411 0.0 5.55067   Low
cufflinks 1.34518 0.0 4.74537   Low
cufflinks 7.19277 0.0 21.0228    
cufflinks 8.23334 0.0 23.7335    

0 Strain