Gene : Phvul.L002532 P. vulgaris v2.1
Defline:  (1 of 1) K09667 - protein O-GlcNAc transferase (OGT) Genomic Order:  10
Name:  ? Phvul.L002532 Secondary Identifier:  ? PAC:37148520
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7437 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L002532 0.5kb upstream 0.5kb upstream 9827 true scaffold_12: 1009571-1019397 Phaseolus vulgaris
Phvul.L002532 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 1009571-1010070 Phaseolus vulgaris
Phvul.L002532 0.5kb downstream 0.5kb downstream 9827 true scaffold_12: 1010071-1019897 Phaseolus vulgaris
Phvul.L002532 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 1019398-1019897 Phaseolus vulgaris
Phvul.L002532 1.0kb upstream 1.0kb upstream 10327 true scaffold_12: 1009071-1019397 Phaseolus vulgaris
Phvul.L002532 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 1009071-1010070 Phaseolus vulgaris
Phvul.L002532 1.0kb downstream 1.0kb downstream 10327 true scaffold_12: 1010071-1020397 Phaseolus vulgaris
Phvul.L002532 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 1019398-1020397 Phaseolus vulgaris
Phvul.L002532 2.0kb upstream 2.0kb upstream 11327 true scaffold_12: 1008071-1019397 Phaseolus vulgaris
Phvul.L002532 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 1008071-1010070 Phaseolus vulgaris
Phvul.L002532 2.0kb downstream 2.0kb downstream 11327 true scaffold_12: 1010071-1021397 Phaseolus vulgaris
Phvul.L002532 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 1019398-1021397 Phaseolus vulgaris
Phvul.L002532 5.0kb upstream 5.0kb upstream 14327 true scaffold_12: 1005071-1019397 Phaseolus vulgaris
Phvul.L002532 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 1005071-1010070 Phaseolus vulgaris
Phvul.L002532 5.0kb downstream 5.0kb downstream 14327 true scaffold_12: 1010071-1024397 Phaseolus vulgaris
Phvul.L002532 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 1019398-1024397 Phaseolus vulgaris
Phvul.L002532 10.0kb upstream 10.0kb upstream 19327 true scaffold_12: 1000071-1019397 Phaseolus vulgaris
Phvul.L002532 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 1000071-1010070 Phaseolus vulgaris
Phvul.L002532 10.0kb downstream 10.0kb downstream 19327 true scaffold_12: 1010071-1029397 Phaseolus vulgaris
Phvul.L002532 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 1019398-1029397 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301556 5265 Fabidae View MSA
124065176 5270 Rosid View MSA
123737161 5271 Pentapetalae View MSA
122791107 5272 Eudicot View MSA
122047286 5273 Angiosperm View MSA
121344424 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0743 0.0 33.8063   Low
cufflinks 26.6446 0.0 70.9399    
cufflinks 19.832 0.0 51.9236    
cufflinks 15.2665 0.0 39.5394   Low
cufflinks 23.0093 0.0 60.5438    
cufflinks 18.1402 0.0 47.2593    
cufflinks 28.8312 0.0 77.3163 High  
cufflinks 26.2087 0.0 69.917    
cufflinks 26.4715 0.0 70.437    
cufflinks 62.7727 0.0 182.301 High High
cufflinks 20.2648 0.0 52.9383    

0 Strain