Gene : Phvul.011G210900 P. vulgaris v2.1
Defline:  (1 of 1) K14573 - nucleolar protein 4 (NOP4, RBM28) Genomic Order:  2104
Name:  ? Phvul.011G210900 Secondary Identifier:  ? PAC:37155760
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G210900 0.5kb upstream 0.5kb upstream 8628 true Chr11: 53014514-53023141 Phaseolus vulgaris
Phvul.011G210900 0.5kb upstream 0.5kb upstream 500 false Chr11: 53022642-53023141 Phaseolus vulgaris
Phvul.011G210900 0.5kb downstream 0.5kb downstream 8628 true Chr11: 53014014-53022641 Phaseolus vulgaris
Phvul.011G210900 0.5kb downstream 0.5kb downstream 500 false Chr11: 53014014-53014513 Phaseolus vulgaris
Phvul.011G210900 1.0kb upstream 1.0kb upstream 9128 true Chr11: 53014514-53023641 Phaseolus vulgaris
Phvul.011G210900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 53022642-53023641 Phaseolus vulgaris
Phvul.011G210900 1.0kb downstream 1.0kb downstream 9128 true Chr11: 53013514-53022641 Phaseolus vulgaris
Phvul.011G210900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 53013514-53014513 Phaseolus vulgaris
Phvul.011G210900 2.0kb upstream 2.0kb upstream 10128 true Chr11: 53014514-53024641 Phaseolus vulgaris
Phvul.011G210900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 53022642-53024641 Phaseolus vulgaris
Phvul.011G210900 2.0kb downstream 2.0kb downstream 10128 true Chr11: 53012514-53022641 Phaseolus vulgaris
Phvul.011G210900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 53012514-53014513 Phaseolus vulgaris
Phvul.011G210900 5.0kb upstream 5.0kb upstream 13128 true Chr11: 53014514-53027641 Phaseolus vulgaris
Phvul.011G210900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 53022642-53027641 Phaseolus vulgaris
Phvul.011G210900 5.0kb downstream 5.0kb downstream 13128 true Chr11: 53009514-53022641 Phaseolus vulgaris
Phvul.011G210900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 53009514-53014513 Phaseolus vulgaris
Phvul.011G210900 10.0kb upstream 10.0kb upstream 18128 true Chr11: 53014514-53032641 Phaseolus vulgaris
Phvul.011G210900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 53022642-53032641 Phaseolus vulgaris
Phvul.011G210900 10.0kb downstream 10.0kb downstream 18128 true Chr11: 53004514-53022641 Phaseolus vulgaris
Phvul.011G210900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 53004514-53014513 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312131 5265 Fabidae View MSA
124062654 5270 Rosid View MSA
123744051 5271 Pentapetalae View MSA
122793233 5272 Eudicot View MSA
122049270 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349565 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30471 0.0 8.1904   Low
cufflinks 6.94363 0.0 20.5827    
cufflinks 5.47751 0.0 17.0998    
cufflinks 2.13645 0.0 7.87409   Low
cufflinks 4.12752 0.0 13.251    
cufflinks 5.06456 0.0 15.6023    
cufflinks 9.55107 0.0 27.8062   High
cufflinks 10.0564 0.0 28.2232   High
cufflinks 8.77793 0.0 28.2661    
cufflinks 7.33308 0.0 21.9222    
cufflinks 3.92227 0.0 12.59    

0 Strain