Gene : Phvul.011G211500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13301//PTHR13301:SF79 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2109
Name:  ? Phvul.011G211500 Secondary Identifier:  ? PAC:37155932
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1001 Phaseolus vulgaris pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G211500 0.5kb upstream 0.5kb upstream 8678 true Chr11: 53103045-53111722 Phaseolus vulgaris
Phvul.011G211500 0.5kb upstream 0.5kb upstream 500 false Chr11: 53103045-53103544 Phaseolus vulgaris
Phvul.011G211500 0.5kb downstream 0.5kb downstream 8678 true Chr11: 53103545-53112222 Phaseolus vulgaris
Phvul.011G211500 0.5kb downstream 0.5kb downstream 500 false Chr11: 53111723-53112222 Phaseolus vulgaris
Phvul.011G211500 1.0kb upstream 1.0kb upstream 9178 true Chr11: 53102545-53111722 Phaseolus vulgaris
Phvul.011G211500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 53102545-53103544 Phaseolus vulgaris
Phvul.011G211500 1.0kb downstream 1.0kb downstream 9178 true Chr11: 53103545-53112722 Phaseolus vulgaris
Phvul.011G211500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 53111723-53112722 Phaseolus vulgaris
Phvul.011G211500 2.0kb upstream 2.0kb upstream 10178 true Chr11: 53101545-53111722 Phaseolus vulgaris
Phvul.011G211500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 53101545-53103544 Phaseolus vulgaris
Phvul.011G211500 2.0kb downstream 2.0kb downstream 10178 true Chr11: 53103545-53113722 Phaseolus vulgaris
Phvul.011G211500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 53111723-53113722 Phaseolus vulgaris
Phvul.011G211500 5.0kb upstream 5.0kb upstream 13178 true Chr11: 53098545-53111722 Phaseolus vulgaris
Phvul.011G211500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 53098545-53103544 Phaseolus vulgaris
Phvul.011G211500 5.0kb downstream 5.0kb downstream 13178 true Chr11: 53103545-53116722 Phaseolus vulgaris
Phvul.011G211500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 53111723-53116722 Phaseolus vulgaris
Phvul.011G211500 10.0kb upstream 10.0kb upstream 18178 true Chr11: 53093545-53111722 Phaseolus vulgaris
Phvul.011G211500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 53093545-53103544 Phaseolus vulgaris
Phvul.011G211500 10.0kb downstream 10.0kb downstream 18178 true Chr11: 53103545-53121722 Phaseolus vulgaris
Phvul.011G211500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 53111723-53121722 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314851 5265 Fabidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.353 0.0 31.9845   Low
cufflinks 27.2896 0.0 73.7077    
cufflinks 84.9566 0.0 265.867 High High
cufflinks 23.3926 0.0 62.0173    
cufflinks 26.9824 0.0 72.6623    
cufflinks 63.6052 0.0 189.526 High High
cufflinks 28.1519 0.0 76.3069 High  
cufflinks 42.6493 0.0 121.057 High  
cufflinks 21.6932 0.0 57.426    
cufflinks 64.9544 0.0 193.885 High High
cufflinks 36.5252 0.0 101.132 High  

0 Strain