Gene : Phvul.011G216000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12953:SF1 - GALACTOSE-BINDING PROTEIN Genomic Order:  2152
Name:  ? Phvul.011G216000 Secondary Identifier:  ? PAC:37155539
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G216000 0.5kb upstream 0.5kb upstream 4787 true Chr11: 53508727-53513513 Phaseolus vulgaris
Phvul.011G216000 0.5kb upstream 0.5kb upstream 500 false Chr11: 53513014-53513513 Phaseolus vulgaris
Phvul.011G216000 0.5kb downstream 0.5kb downstream 4787 true Chr11: 53508227-53513013 Phaseolus vulgaris
Phvul.011G216000 0.5kb downstream 0.5kb downstream 500 false Chr11: 53508227-53508726 Phaseolus vulgaris
Phvul.011G216000 1.0kb upstream 1.0kb upstream 5287 true Chr11: 53508727-53514013 Phaseolus vulgaris
Phvul.011G216000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 53513014-53514013 Phaseolus vulgaris
Phvul.011G216000 1.0kb downstream 1.0kb downstream 5287 true Chr11: 53507727-53513013 Phaseolus vulgaris
Phvul.011G216000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 53507727-53508726 Phaseolus vulgaris
Phvul.011G216000 2.0kb upstream 2.0kb upstream 6287 true Chr11: 53508727-53515013 Phaseolus vulgaris
Phvul.011G216000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 53513014-53515013 Phaseolus vulgaris
Phvul.011G216000 2.0kb downstream 2.0kb downstream 6287 true Chr11: 53506727-53513013 Phaseolus vulgaris
Phvul.011G216000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 53506727-53508726 Phaseolus vulgaris
Phvul.011G216000 5.0kb upstream 5.0kb upstream 9287 true Chr11: 53508727-53518013 Phaseolus vulgaris
Phvul.011G216000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 53513014-53518013 Phaseolus vulgaris
Phvul.011G216000 5.0kb downstream 5.0kb downstream 9287 true Chr11: 53503727-53513013 Phaseolus vulgaris
Phvul.011G216000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 53503727-53508726 Phaseolus vulgaris
Phvul.011G216000 10.0kb upstream 10.0kb upstream 14287 true Chr11: 53508727-53523013 Phaseolus vulgaris
Phvul.011G216000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 53513014-53523013 Phaseolus vulgaris
Phvul.011G216000 10.0kb downstream 10.0kb downstream 14287 true Chr11: 53498727-53513013 Phaseolus vulgaris
Phvul.011G216000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 53498727-53508726 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310796 5265 Fabidae View MSA
124061836 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.76393 0.0 10.9658   Low
cufflinks 5.32251 0.0 15.0324    
cufflinks 9.36839 0.0 25.0776   High
cufflinks 3.44465 0.0 10.2821   Low
cufflinks 5.02729 0.0 14.3894    
cufflinks 7.63319 0.0 20.8514    
cufflinks 6.58835 0.0 18.2498    
cufflinks 8.93026 0.0 23.9744   High
cufflinks 5.35582 0.0 15.1599    
cufflinks 6.67385 0.0 18.4928    
cufflinks 4.88822 0.0 14.0124    

0 Strain