Gene : Phvul.011G206600 P. vulgaris v2.1
Defline:  (1 of 2) PF16053 - Mitochondrial 28S ribosomal protein S34 (MRP-S34) Genomic Order:  2065
Name:  ? Phvul.011G206600 Secondary Identifier:  ? PAC:37154754
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G206600 0.5kb upstream 0.5kb upstream 2937 true Chr11: 52408489-52411425 Phaseolus vulgaris
Phvul.011G206600 0.5kb upstream 0.5kb upstream 500 false Chr11: 52410926-52411425 Phaseolus vulgaris
Phvul.011G206600 0.5kb downstream 0.5kb downstream 2937 true Chr11: 52407989-52410925 Phaseolus vulgaris
Phvul.011G206600 0.5kb downstream 0.5kb downstream 500 false Chr11: 52407989-52408488 Phaseolus vulgaris
Phvul.011G206600 1.0kb upstream 1.0kb upstream 3437 true Chr11: 52408489-52411925 Phaseolus vulgaris
Phvul.011G206600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 52410926-52411925 Phaseolus vulgaris
Phvul.011G206600 1.0kb downstream 1.0kb downstream 3437 true Chr11: 52407489-52410925 Phaseolus vulgaris
Phvul.011G206600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 52407489-52408488 Phaseolus vulgaris
Phvul.011G206600 2.0kb upstream 2.0kb upstream 4437 true Chr11: 52408489-52412925 Phaseolus vulgaris
Phvul.011G206600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 52410926-52412925 Phaseolus vulgaris
Phvul.011G206600 2.0kb downstream 2.0kb downstream 4437 true Chr11: 52406489-52410925 Phaseolus vulgaris
Phvul.011G206600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 52406489-52408488 Phaseolus vulgaris
Phvul.011G206600 5.0kb upstream 5.0kb upstream 7437 true Chr11: 52408489-52415925 Phaseolus vulgaris
Phvul.011G206600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 52410926-52415925 Phaseolus vulgaris
Phvul.011G206600 5.0kb downstream 5.0kb downstream 7437 true Chr11: 52403489-52410925 Phaseolus vulgaris
Phvul.011G206600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 52403489-52408488 Phaseolus vulgaris
Phvul.011G206600 10.0kb upstream 10.0kb upstream 12437 true Chr11: 52408489-52420925 Phaseolus vulgaris
Phvul.011G206600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 52410926-52420925 Phaseolus vulgaris
Phvul.011G206600 10.0kb downstream 10.0kb downstream 12437 true Chr11: 52398489-52410925 Phaseolus vulgaris
Phvul.011G206600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 52398489-52408488 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314231 5265 Fabidae View MSA
124062726 5270 Rosid View MSA
123743415 5271 Pentapetalae View MSA
122794172 5272 Eudicot View MSA
122043343 5273 Angiosperm View MSA
121350318 5274 Embryophyte View MSA
123423853 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79267 0.0 30.007    
cufflinks 7.25882 0.0 37.6603   High
cufflinks 6.04399 0.0 30.8878   High
cufflinks 4.77556 0.0 18.0563    
cufflinks 1.49716 0.0 10.7425   Low
cufflinks 5.36845 0.0 29.2023    
cufflinks 1.71877 0.0 12.3372   Low
cufflinks 3.27127 0.0 22.4704    
cufflinks 2.14687 0.0 20.1766    
cufflinks 1.81828 0.0 12.4978   Low
cufflinks 2.34125 0.0 15.4801    

0 Strain