Gene : Phvul.011G196300 P. vulgaris v2.1
Genomic Order:  1954 Name:  ? Phvul.011G196300
Secondary Identifier:  ? PAC:37157331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G196300 0.5kb upstream 0.5kb upstream 3971 true Chr11: 51020066-51024036 Phaseolus vulgaris
Phvul.011G196300 0.5kb upstream 0.5kb upstream 500 false Chr11: 51023537-51024036 Phaseolus vulgaris
Phvul.011G196300 0.5kb downstream 0.5kb downstream 3971 true Chr11: 51019566-51023536 Phaseolus vulgaris
Phvul.011G196300 0.5kb downstream 0.5kb downstream 500 false Chr11: 51019566-51020065 Phaseolus vulgaris
Phvul.011G196300 1.0kb upstream 1.0kb upstream 4471 true Chr11: 51020066-51024536 Phaseolus vulgaris
Phvul.011G196300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 51023537-51024536 Phaseolus vulgaris
Phvul.011G196300 1.0kb downstream 1.0kb downstream 4471 true Chr11: 51019066-51023536 Phaseolus vulgaris
Phvul.011G196300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 51019066-51020065 Phaseolus vulgaris
Phvul.011G196300 2.0kb upstream 2.0kb upstream 5471 true Chr11: 51020066-51025536 Phaseolus vulgaris
Phvul.011G196300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 51023537-51025536 Phaseolus vulgaris
Phvul.011G196300 2.0kb downstream 2.0kb downstream 5471 true Chr11: 51018066-51023536 Phaseolus vulgaris
Phvul.011G196300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 51018066-51020065 Phaseolus vulgaris
Phvul.011G196300 5.0kb upstream 5.0kb upstream 8471 true Chr11: 51020066-51028536 Phaseolus vulgaris
Phvul.011G196300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 51023537-51028536 Phaseolus vulgaris
Phvul.011G196300 5.0kb downstream 5.0kb downstream 8471 true Chr11: 51015066-51023536 Phaseolus vulgaris
Phvul.011G196300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 51015066-51020065 Phaseolus vulgaris
Phvul.011G196300 10.0kb upstream 10.0kb upstream 13471 true Chr11: 51020066-51033536 Phaseolus vulgaris
Phvul.011G196300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 51023537-51033536 Phaseolus vulgaris
Phvul.011G196300 10.0kb downstream 10.0kb downstream 13471 true Chr11: 51010066-51023536 Phaseolus vulgaris
Phvul.011G196300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 51010066-51020065 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297510 5265 Fabidae View MSA
124063502 5270 Rosid View MSA
123746893 5271 Pentapetalae View MSA
122791489 5272 Eudicot View MSA
122045996 5273 Angiosperm View MSA
121344407 5274 Embryophyte View MSA
123380038 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.34389 0.0 14.8064    
cufflinks 4.73614 0.0 13.226    
cufflinks 3.21902 0.0 9.32533   Low
cufflinks 4.83471 0.0 13.5378    
cufflinks 4.95573 0.0 13.8668    
cufflinks 4.38768 0.0 12.3318    
cufflinks 3.41232 0.0 9.7962   Low
cufflinks 3.0691 0.0 8.89333   Low
cufflinks 3.45887 0.0 9.91948    
cufflinks 4.84265 0.0 13.519    
cufflinks 6.08322 0.0 16.6628   High

0 Strain