Gene : Phvul.011G179800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10794:SF53 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  1783
Name:  ? Phvul.011G179800 Secondary Identifier:  ? PAC:37156216
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G179800 0.5kb upstream 0.5kb upstream 7116 true Chr11: 49129741-49136856 Phaseolus vulgaris
Phvul.011G179800 0.5kb upstream 0.5kb upstream 500 false Chr11: 49136357-49136856 Phaseolus vulgaris
Phvul.011G179800 0.5kb downstream 0.5kb downstream 7116 true Chr11: 49129241-49136356 Phaseolus vulgaris
Phvul.011G179800 0.5kb downstream 0.5kb downstream 500 false Chr11: 49129241-49129740 Phaseolus vulgaris
Phvul.011G179800 1.0kb upstream 1.0kb upstream 7616 true Chr11: 49129741-49137356 Phaseolus vulgaris
Phvul.011G179800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 49136357-49137356 Phaseolus vulgaris
Phvul.011G179800 1.0kb downstream 1.0kb downstream 7616 true Chr11: 49128741-49136356 Phaseolus vulgaris
Phvul.011G179800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 49128741-49129740 Phaseolus vulgaris
Phvul.011G179800 2.0kb upstream 2.0kb upstream 8616 true Chr11: 49129741-49138356 Phaseolus vulgaris
Phvul.011G179800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 49136357-49138356 Phaseolus vulgaris
Phvul.011G179800 2.0kb downstream 2.0kb downstream 8616 true Chr11: 49127741-49136356 Phaseolus vulgaris
Phvul.011G179800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 49127741-49129740 Phaseolus vulgaris
Phvul.011G179800 5.0kb upstream 5.0kb upstream 11616 true Chr11: 49129741-49141356 Phaseolus vulgaris
Phvul.011G179800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 49136357-49141356 Phaseolus vulgaris
Phvul.011G179800 5.0kb downstream 5.0kb downstream 11616 true Chr11: 49124741-49136356 Phaseolus vulgaris
Phvul.011G179800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 49124741-49129740 Phaseolus vulgaris
Phvul.011G179800 10.0kb upstream 10.0kb upstream 16616 true Chr11: 49129741-49146356 Phaseolus vulgaris
Phvul.011G179800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 49136357-49146356 Phaseolus vulgaris
Phvul.011G179800 10.0kb downstream 10.0kb downstream 16616 true Chr11: 49119741-49136356 Phaseolus vulgaris
Phvul.011G179800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 49119741-49129740 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305816 5265 Fabidae View MSA
124063785 5270 Rosid View MSA
123740423 5271 Pentapetalae View MSA
122790684 5272 Eudicot View MSA
122042712 5273 Angiosperm View MSA
121349023 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.68818 0.0 20.9844    
cufflinks 7.30477 0.0 26.0204    
cufflinks 43.9078 0.0 141.243 High High
cufflinks 6.48173 0.0 25.847    
cufflinks 5.57255 0.0 17.4719    
cufflinks 20.5592 0.0 70.8018   High
cufflinks 1.31644 0.0 5.80238   Low
cufflinks 1.55318 0.0 6.44028   Low
cufflinks 1.25929 0.0 5.63231   Low
cufflinks 4.3978 0.0 18.8246    
cufflinks 3.11515 0.0 10.9862    

0 Strain