Gene : Phvul.011G181800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  1804
Name:  ? Phvul.011G181800 Secondary Identifier:  ? PAC:37155402
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G181800 0.5kb upstream 0.5kb upstream 7656 true Chr11: 49423800-49431455 Phaseolus vulgaris
Phvul.011G181800 0.5kb upstream 0.5kb upstream 500 false Chr11: 49423800-49424299 Phaseolus vulgaris
Phvul.011G181800 0.5kb downstream 0.5kb downstream 7656 true Chr11: 49424300-49431955 Phaseolus vulgaris
Phvul.011G181800 0.5kb downstream 0.5kb downstream 500 false Chr11: 49431456-49431955 Phaseolus vulgaris
Phvul.011G181800 1.0kb upstream 1.0kb upstream 8156 true Chr11: 49423300-49431455 Phaseolus vulgaris
Phvul.011G181800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 49423300-49424299 Phaseolus vulgaris
Phvul.011G181800 1.0kb downstream 1.0kb downstream 8156 true Chr11: 49424300-49432455 Phaseolus vulgaris
Phvul.011G181800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 49431456-49432455 Phaseolus vulgaris
Phvul.011G181800 2.0kb upstream 2.0kb upstream 9156 true Chr11: 49422300-49431455 Phaseolus vulgaris
Phvul.011G181800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 49422300-49424299 Phaseolus vulgaris
Phvul.011G181800 2.0kb downstream 2.0kb downstream 9156 true Chr11: 49424300-49433455 Phaseolus vulgaris
Phvul.011G181800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 49431456-49433455 Phaseolus vulgaris
Phvul.011G181800 5.0kb upstream 5.0kb upstream 12156 true Chr11: 49419300-49431455 Phaseolus vulgaris
Phvul.011G181800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 49419300-49424299 Phaseolus vulgaris
Phvul.011G181800 5.0kb downstream 5.0kb downstream 12156 true Chr11: 49424300-49436455 Phaseolus vulgaris
Phvul.011G181800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 49431456-49436455 Phaseolus vulgaris
Phvul.011G181800 10.0kb upstream 10.0kb upstream 17156 true Chr11: 49414300-49431455 Phaseolus vulgaris
Phvul.011G181800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 49414300-49424299 Phaseolus vulgaris
Phvul.011G181800 10.0kb downstream 10.0kb downstream 17156 true Chr11: 49424300-49441455 Phaseolus vulgaris
Phvul.011G181800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 49431456-49441455 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309593 5265 Fabidae View MSA
124069116 5270 Rosid View MSA
123736390 5271 Pentapetalae View MSA
122788335 5272 Eudicot View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2902 0.0 27.069   High
cufflinks 0.566732 0.0 2.00406    
cufflinks 2.98724 0.0 8.69551    
cufflinks 0.237567 0.0 0.909774 Low Low
cufflinks 0.630527 0.0 2.21974    
cufflinks 0.77196 0.0 2.63766    
cufflinks 3.8175 0.0 10.8906    
cufflinks 28.6508 0.0 74.7983 High High
cufflinks 0.479713 0.0 1.7236 Low  
cufflinks 1.24421 0.0 4.0386    
cufflinks 1.02007 0.0 3.40558    

0 Strain