Gene : Phvul.011G184300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11527//PTHR11527:SF144 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  1832
Name:  ? Phvul.011G184300 Secondary Identifier:  ? PAC:37157183
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G184300 0.5kb upstream 0.5kb upstream 4955 true Chr11: 49788169-49793123 Phaseolus vulgaris
Phvul.011G184300 0.5kb upstream 0.5kb upstream 500 false Chr11: 49788169-49788668 Phaseolus vulgaris
Phvul.011G184300 0.5kb downstream 0.5kb downstream 4955 true Chr11: 49788669-49793623 Phaseolus vulgaris
Phvul.011G184300 0.5kb downstream 0.5kb downstream 500 false Chr11: 49793124-49793623 Phaseolus vulgaris
Phvul.011G184300 1.0kb upstream 1.0kb upstream 5455 true Chr11: 49787669-49793123 Phaseolus vulgaris
Phvul.011G184300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 49787669-49788668 Phaseolus vulgaris
Phvul.011G184300 1.0kb downstream 1.0kb downstream 5455 true Chr11: 49788669-49794123 Phaseolus vulgaris
Phvul.011G184300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 49793124-49794123 Phaseolus vulgaris
Phvul.011G184300 2.0kb upstream 2.0kb upstream 6455 true Chr11: 49786669-49793123 Phaseolus vulgaris
Phvul.011G184300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 49786669-49788668 Phaseolus vulgaris
Phvul.011G184300 2.0kb downstream 2.0kb downstream 6455 true Chr11: 49788669-49795123 Phaseolus vulgaris
Phvul.011G184300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 49793124-49795123 Phaseolus vulgaris
Phvul.011G184300 5.0kb upstream 5.0kb upstream 9455 true Chr11: 49783669-49793123 Phaseolus vulgaris
Phvul.011G184300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 49783669-49788668 Phaseolus vulgaris
Phvul.011G184300 5.0kb downstream 5.0kb downstream 9455 true Chr11: 49788669-49798123 Phaseolus vulgaris
Phvul.011G184300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 49793124-49798123 Phaseolus vulgaris
Phvul.011G184300 10.0kb upstream 10.0kb upstream 14455 true Chr11: 49778669-49793123 Phaseolus vulgaris
Phvul.011G184300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 49778669-49788668 Phaseolus vulgaris
Phvul.011G184300 10.0kb downstream 10.0kb downstream 14455 true Chr11: 49788669-49803123 Phaseolus vulgaris
Phvul.011G184300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 49793124-49803123 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312292 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.451864 0.0 1.65594    
cufflinks 1.25919 0.0 4.13979    
cufflinks 2.2297 0.0 6.8327    
cufflinks 0.593562 0.0 2.133    
cufflinks 3.65572 0.0 10.8265    
cufflinks 1.11315 0.0 3.70057    
cufflinks 4.2512 0.0 12.0899    
cufflinks 1.27578 0.0 4.14205    
cufflinks 6.09153 0.0 16.735   High
cufflinks 0.103486 0.0 0.427969 Low Low
cufflinks 4.53757 0.0 12.9973    

0 Strain