Gene : Phvul.011G187300 P. vulgaris v2.1
Defline:  (1 of 2) 2.1.1.100 - Protein-S-isoprenylcysteine O-methyltransferase / Prenylcysteine carboxyl methyltransferase Genomic Order:  1862
Name:  ? Phvul.011G187300 Secondary Identifier:  ? PAC:37156190
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G187300 0.5kb upstream 0.5kb upstream 3156 true Chr11: 50083800-50086955 Phaseolus vulgaris
Phvul.011G187300 0.5kb upstream 0.5kb upstream 500 false Chr11: 50083800-50084299 Phaseolus vulgaris
Phvul.011G187300 0.5kb downstream 0.5kb downstream 3156 true Chr11: 50084300-50087455 Phaseolus vulgaris
Phvul.011G187300 0.5kb downstream 0.5kb downstream 500 false Chr11: 50086956-50087455 Phaseolus vulgaris
Phvul.011G187300 1.0kb upstream 1.0kb upstream 3656 true Chr11: 50083300-50086955 Phaseolus vulgaris
Phvul.011G187300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 50083300-50084299 Phaseolus vulgaris
Phvul.011G187300 1.0kb downstream 1.0kb downstream 3656 true Chr11: 50084300-50087955 Phaseolus vulgaris
Phvul.011G187300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 50086956-50087955 Phaseolus vulgaris
Phvul.011G187300 2.0kb upstream 2.0kb upstream 4656 true Chr11: 50082300-50086955 Phaseolus vulgaris
Phvul.011G187300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 50082300-50084299 Phaseolus vulgaris
Phvul.011G187300 2.0kb downstream 2.0kb downstream 4656 true Chr11: 50084300-50088955 Phaseolus vulgaris
Phvul.011G187300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 50086956-50088955 Phaseolus vulgaris
Phvul.011G187300 5.0kb upstream 5.0kb upstream 7656 true Chr11: 50079300-50086955 Phaseolus vulgaris
Phvul.011G187300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 50079300-50084299 Phaseolus vulgaris
Phvul.011G187300 5.0kb downstream 5.0kb downstream 7656 true Chr11: 50084300-50091955 Phaseolus vulgaris
Phvul.011G187300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 50086956-50091955 Phaseolus vulgaris
Phvul.011G187300 10.0kb upstream 10.0kb upstream 12656 true Chr11: 50074300-50086955 Phaseolus vulgaris
Phvul.011G187300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 50074300-50084299 Phaseolus vulgaris
Phvul.011G187300 10.0kb downstream 10.0kb downstream 12656 true Chr11: 50084300-50096955 Phaseolus vulgaris
Phvul.011G187300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 50086956-50096955 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301431 5265 Fabidae View MSA
124062304 5270 Rosid View MSA
123748138 5271 Pentapetalae View MSA
122787241 5272 Eudicot View MSA
122044500 5273 Angiosperm View MSA
121344289 5274 Embryophyte View MSA
123425491 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.21981 0.0 18.3326    
cufflinks 7.31901 0.0 28.0177    
cufflinks 10.3847 0.0 36.6112   High
cufflinks 7.55702 0.0 24.8529    
cufflinks 5.85441 0.0 23.7998    
cufflinks 11.9283 0.0 41.3276   High
cufflinks 2.33188 0.0 10.4533   Low
cufflinks 3.01893 0.0 12.7029    
cufflinks 2.72717 0.0 11.6759   Low
cufflinks 4.40465 0.0 16.3516    
cufflinks 2.7693 0.0 11.9946   Low

0 Strain