Gene : Phvul.011G172300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31942:SF15 - MLO-LIKE PROTEIN 11-RELATED Genomic Order:  1706
Name:  ? Phvul.011G172300 Secondary Identifier:  ? PAC:37155799
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G172300 0.5kb upstream 0.5kb upstream 9757 true Chr11: 48013535-48023291 Phaseolus vulgaris
Phvul.011G172300 0.5kb upstream 0.5kb upstream 500 false Chr11: 48022792-48023291 Phaseolus vulgaris
Phvul.011G172300 0.5kb downstream 0.5kb downstream 9757 true Chr11: 48013035-48022791 Phaseolus vulgaris
Phvul.011G172300 0.5kb downstream 0.5kb downstream 500 false Chr11: 48013035-48013534 Phaseolus vulgaris
Phvul.011G172300 1.0kb upstream 1.0kb upstream 10257 true Chr11: 48013535-48023791 Phaseolus vulgaris
Phvul.011G172300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 48022792-48023791 Phaseolus vulgaris
Phvul.011G172300 1.0kb downstream 1.0kb downstream 10257 true Chr11: 48012535-48022791 Phaseolus vulgaris
Phvul.011G172300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 48012535-48013534 Phaseolus vulgaris
Phvul.011G172300 2.0kb upstream 2.0kb upstream 11257 true Chr11: 48013535-48024791 Phaseolus vulgaris
Phvul.011G172300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 48022792-48024791 Phaseolus vulgaris
Phvul.011G172300 2.0kb downstream 2.0kb downstream 11257 true Chr11: 48011535-48022791 Phaseolus vulgaris
Phvul.011G172300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 48011535-48013534 Phaseolus vulgaris
Phvul.011G172300 5.0kb upstream 5.0kb upstream 14257 true Chr11: 48013535-48027791 Phaseolus vulgaris
Phvul.011G172300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 48022792-48027791 Phaseolus vulgaris
Phvul.011G172300 5.0kb downstream 5.0kb downstream 14257 true Chr11: 48008535-48022791 Phaseolus vulgaris
Phvul.011G172300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 48008535-48013534 Phaseolus vulgaris
Phvul.011G172300 10.0kb upstream 10.0kb upstream 19257 true Chr11: 48013535-48032791 Phaseolus vulgaris
Phvul.011G172300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 48022792-48032791 Phaseolus vulgaris
Phvul.011G172300 10.0kb downstream 10.0kb downstream 19257 true Chr11: 48003535-48022791 Phaseolus vulgaris
Phvul.011G172300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 48003535-48013534 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302883 5265 Fabidae View MSA
124061204 5270 Rosid View MSA
123749822 5271 Pentapetalae View MSA
122795258 5272 Eudicot View MSA
122048156 5273 Angiosperm View MSA
121351201 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.06648 0.0 5.13082   Low
cufflinks 2.25472 0.0 11.2464    
cufflinks 3.63234 0.0 14.7178    
cufflinks 2.1854 0.0 7.13459    
cufflinks 5.40043 0.0 20.5769    
cufflinks 3.96688 0.0 18.0445    
cufflinks 5.79135 0.0 24.4056    
cufflinks 6.31601 0.0 30.8724   High
cufflinks 5.55756 0.0 21.0377    
cufflinks 2.33353 0.0 14.4522    
cufflinks 5.1327 0.0 19.8729    

0 Strain