Gene : Phvul.011G174800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23305:SF12 - GTP-BINDING PROTEIN-RELATED Genomic Order:  1731
Name:  ? Phvul.011G174800 Secondary Identifier:  ? PAC:37156535
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G174800 0.5kb upstream 0.5kb upstream 10833 true Chr11: 48512461-48523293 Phaseolus vulgaris
Phvul.011G174800 0.5kb upstream 0.5kb upstream 500 false Chr11: 48522794-48523293 Phaseolus vulgaris
Phvul.011G174800 0.5kb downstream 0.5kb downstream 10833 true Chr11: 48511961-48522793 Phaseolus vulgaris
Phvul.011G174800 0.5kb downstream 0.5kb downstream 500 false Chr11: 48511961-48512460 Phaseolus vulgaris
Phvul.011G174800 1.0kb upstream 1.0kb upstream 11333 true Chr11: 48512461-48523793 Phaseolus vulgaris
Phvul.011G174800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 48522794-48523793 Phaseolus vulgaris
Phvul.011G174800 1.0kb downstream 1.0kb downstream 11333 true Chr11: 48511461-48522793 Phaseolus vulgaris
Phvul.011G174800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 48511461-48512460 Phaseolus vulgaris
Phvul.011G174800 2.0kb upstream 2.0kb upstream 12333 true Chr11: 48512461-48524793 Phaseolus vulgaris
Phvul.011G174800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 48522794-48524793 Phaseolus vulgaris
Phvul.011G174800 2.0kb downstream 2.0kb downstream 12333 true Chr11: 48510461-48522793 Phaseolus vulgaris
Phvul.011G174800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 48510461-48512460 Phaseolus vulgaris
Phvul.011G174800 5.0kb upstream 5.0kb upstream 15333 true Chr11: 48512461-48527793 Phaseolus vulgaris
Phvul.011G174800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 48522794-48527793 Phaseolus vulgaris
Phvul.011G174800 5.0kb downstream 5.0kb downstream 15333 true Chr11: 48507461-48522793 Phaseolus vulgaris
Phvul.011G174800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 48507461-48512460 Phaseolus vulgaris
Phvul.011G174800 10.0kb upstream 10.0kb upstream 20333 true Chr11: 48512461-48532793 Phaseolus vulgaris
Phvul.011G174800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 48522794-48532793 Phaseolus vulgaris
Phvul.011G174800 10.0kb downstream 10.0kb downstream 20333 true Chr11: 48502461-48522793 Phaseolus vulgaris
Phvul.011G174800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 48502461-48512460 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302507 5265 Fabidae View MSA
124061992 5270 Rosid View MSA
123739413 5271 Pentapetalae View MSA
122786504 5272 Eudicot View MSA
122050132 5273 Angiosperm View MSA
121346594 5274 Embryophyte View MSA
123424688 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5557 0.0 28.3824    
cufflinks 10.6234 0.0 28.5884    
cufflinks 69.4879 0.0 187.665 High High
cufflinks 9.81601 0.0 26.7574    
cufflinks 7.34477 0.0 20.5081    
cufflinks 21.728 0.0 56.2897   High
cufflinks 3.95498 0.0 11.711   Low
cufflinks 6.01608 0.0 16.9723    
cufflinks 4.79178 0.0 13.9108    
cufflinks 6.69239 0.0 18.7635    
cufflinks 5.49197 0.0 15.7552    

0 Strain