Gene : Phvul.011G173000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10173:SF38 - PEPTIDE METHIONINE SULFOXIDE REDUCTASE B1, CHLOROPLASTIC Genomic Order:  1713
Name:  ? Phvul.011G173000 Secondary Identifier:  ? PAC:37157390
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G173000 0.5kb upstream 0.5kb upstream 6662 true Chr11: 48117890-48124551 Phaseolus vulgaris
Phvul.011G173000 0.5kb upstream 0.5kb upstream 500 false Chr11: 48117890-48118389 Phaseolus vulgaris
Phvul.011G173000 0.5kb downstream 0.5kb downstream 6662 true Chr11: 48118390-48125051 Phaseolus vulgaris
Phvul.011G173000 0.5kb downstream 0.5kb downstream 500 false Chr11: 48124552-48125051 Phaseolus vulgaris
Phvul.011G173000 1.0kb upstream 1.0kb upstream 7162 true Chr11: 48117390-48124551 Phaseolus vulgaris
Phvul.011G173000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 48117390-48118389 Phaseolus vulgaris
Phvul.011G173000 1.0kb downstream 1.0kb downstream 7162 true Chr11: 48118390-48125551 Phaseolus vulgaris
Phvul.011G173000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 48124552-48125551 Phaseolus vulgaris
Phvul.011G173000 2.0kb upstream 2.0kb upstream 8162 true Chr11: 48116390-48124551 Phaseolus vulgaris
Phvul.011G173000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 48116390-48118389 Phaseolus vulgaris
Phvul.011G173000 2.0kb downstream 2.0kb downstream 8162 true Chr11: 48118390-48126551 Phaseolus vulgaris
Phvul.011G173000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 48124552-48126551 Phaseolus vulgaris
Phvul.011G173000 5.0kb upstream 5.0kb upstream 11162 true Chr11: 48113390-48124551 Phaseolus vulgaris
Phvul.011G173000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 48113390-48118389 Phaseolus vulgaris
Phvul.011G173000 5.0kb downstream 5.0kb downstream 11162 true Chr11: 48118390-48129551 Phaseolus vulgaris
Phvul.011G173000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 48124552-48129551 Phaseolus vulgaris
Phvul.011G173000 10.0kb upstream 10.0kb upstream 16162 true Chr11: 48108390-48124551 Phaseolus vulgaris
Phvul.011G173000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 48108390-48118389 Phaseolus vulgaris
Phvul.011G173000 10.0kb downstream 10.0kb downstream 16162 true Chr11: 48118390-48134551 Phaseolus vulgaris
Phvul.011G173000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 48124552-48134551 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301625 5265 Fabidae View MSA
124067665 5270 Rosid View MSA
123746660 5271 Pentapetalae View MSA
122792336 5272 Eudicot View MSA
122047974 5273 Angiosperm View MSA
121348855 5274 Embryophyte View MSA
123426618 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.5392 0.0 100.453 High High
cufflinks 12.0804 0.0 34.3894    
cufflinks 72.5922 0.0 188.144 High High
cufflinks 24.6356 0.0 65.9755    
cufflinks 10.1925 0.0 29.7872    
cufflinks 25.4018 0.0 67.7341    
cufflinks 5.59359 0.0 17.339   Low
cufflinks 6.18929 0.0 18.8979   Low
cufflinks 5.03036 0.0 15.8016   Low
cufflinks 16.3253 0.0 45.2804    
cufflinks 16.0328 0.0 44.6394    

0 Strain