Gene : Phvul.011G177800 P. vulgaris v2.1

Defline:  (1 of 1) KOG4595 - Uncharacterized conserved protein Genomic Order:  1763
Name:  ? Phvul.011G177800 Secondary Identifier:  ? PAC:37155936

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G177800 0.5kb upstream 0.5kb upstream 4744 true Chr11: 48928390-48933133 Phaseolus vulgaris
Phvul.011G177800 0.5kb upstream 0.5kb upstream 500 false Chr11: 48928390-48928889 Phaseolus vulgaris
Phvul.011G177800 0.5kb downstream 0.5kb downstream 4744 true Chr11: 48928890-48933633 Phaseolus vulgaris
Phvul.011G177800 0.5kb downstream 0.5kb downstream 500 false Chr11: 48933134-48933633 Phaseolus vulgaris
Phvul.011G177800 1.0kb upstream 1.0kb upstream 5244 true Chr11: 48927890-48933133 Phaseolus vulgaris
Phvul.011G177800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 48927890-48928889 Phaseolus vulgaris
Phvul.011G177800 1.0kb downstream 1.0kb downstream 5244 true Chr11: 48928890-48934133 Phaseolus vulgaris
Phvul.011G177800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 48933134-48934133 Phaseolus vulgaris
Phvul.011G177800 2.0kb upstream 2.0kb upstream 6244 true Chr11: 48926890-48933133 Phaseolus vulgaris
Phvul.011G177800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 48926890-48928889 Phaseolus vulgaris
Phvul.011G177800 2.0kb downstream 2.0kb downstream 6244 true Chr11: 48928890-48935133 Phaseolus vulgaris
Phvul.011G177800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 48933134-48935133 Phaseolus vulgaris
Phvul.011G177800 5.0kb upstream 5.0kb upstream 9244 true Chr11: 48923890-48933133 Phaseolus vulgaris
Phvul.011G177800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 48923890-48928889 Phaseolus vulgaris
Phvul.011G177800 5.0kb downstream 5.0kb downstream 9244 true Chr11: 48928890-48938133 Phaseolus vulgaris
Phvul.011G177800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 48933134-48938133 Phaseolus vulgaris
Phvul.011G177800 10.0kb upstream 10.0kb upstream 14244 true Chr11: 48918890-48933133 Phaseolus vulgaris
Phvul.011G177800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 48918890-48928889 Phaseolus vulgaris
Phvul.011G177800 10.0kb downstream 10.0kb downstream 14244 true Chr11: 48928890-48943133 Phaseolus vulgaris
Phvul.011G177800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 48933134-48943133 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312345 5265 Fabidae View MSA
124064730 5270 Rosid View MSA
123753650 5271 Pentapetalae View MSA
122788373 5272 Eudicot View MSA
122044441 5273 Angiosperm View MSA
121344709 5274 Embryophyte View MSA
123425132 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9316 0.0 44.3432    
cufflinks 15.9991 0.0 44.3926    
cufflinks 6.95204 0.0 21.1349   Low
cufflinks 22.9502 0.0 62.0817   High
cufflinks 13.0658 0.0 37.0123    
cufflinks 7.62825 0.0 22.8592   Low
cufflinks 8.22233 0.0 24.3785    
cufflinks 10.6818 0.0 30.9642    
cufflinks 7.81814 0.0 23.3174   Low
cufflinks 17.9462 0.0 49.1922   High
cufflinks 12.0976 0.0 34.3578    

0 Strain