Gene : Phvul.011G165700 P. vulgaris v2.1
Defline:  (1 of 8) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  1638
Name:  ? Phvul.011G165700 Secondary Identifier:  ? PAC:37154744
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G165700 0.5kb upstream 0.5kb upstream 5390 true Chr11: 46961006-46966395 Phaseolus vulgaris
Phvul.011G165700 0.5kb upstream 0.5kb upstream 500 false Chr11: 46965896-46966395 Phaseolus vulgaris
Phvul.011G165700 0.5kb downstream 0.5kb downstream 5390 true Chr11: 46960506-46965895 Phaseolus vulgaris
Phvul.011G165700 0.5kb downstream 0.5kb downstream 500 false Chr11: 46960506-46961005 Phaseolus vulgaris
Phvul.011G165700 1.0kb upstream 1.0kb upstream 5890 true Chr11: 46961006-46966895 Phaseolus vulgaris
Phvul.011G165700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 46965896-46966895 Phaseolus vulgaris
Phvul.011G165700 1.0kb downstream 1.0kb downstream 5890 true Chr11: 46960006-46965895 Phaseolus vulgaris
Phvul.011G165700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 46960006-46961005 Phaseolus vulgaris
Phvul.011G165700 2.0kb upstream 2.0kb upstream 6890 true Chr11: 46961006-46967895 Phaseolus vulgaris
Phvul.011G165700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 46965896-46967895 Phaseolus vulgaris
Phvul.011G165700 2.0kb downstream 2.0kb downstream 6890 true Chr11: 46959006-46965895 Phaseolus vulgaris
Phvul.011G165700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 46959006-46961005 Phaseolus vulgaris
Phvul.011G165700 5.0kb upstream 5.0kb upstream 9890 true Chr11: 46961006-46970895 Phaseolus vulgaris
Phvul.011G165700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 46965896-46970895 Phaseolus vulgaris
Phvul.011G165700 5.0kb downstream 5.0kb downstream 9890 true Chr11: 46956006-46965895 Phaseolus vulgaris
Phvul.011G165700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 46956006-46961005 Phaseolus vulgaris
Phvul.011G165700 10.0kb upstream 10.0kb upstream 14890 true Chr11: 46961006-46975895 Phaseolus vulgaris
Phvul.011G165700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 46965896-46975895 Phaseolus vulgaris
Phvul.011G165700 10.0kb downstream 10.0kb downstream 14890 true Chr11: 46951006-46965895 Phaseolus vulgaris
Phvul.011G165700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 46951006-46961005 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
122297517 5265 Fabidae View MSA
124063143 5270 Rosid View MSA
123743668 5271 Pentapetalae View MSA
122791275 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.06965 0.0 13.1962   Low
cufflinks 8.06482 0.0 34.8723    
cufflinks 2.76309 0.0 12.9728   Low
cufflinks 1.46633 0.0 8.62812   Low
cufflinks 12.0308 0.0 34.3724    
cufflinks 5.96445 0.0 24.8865    
cufflinks 16.4242 0.0 60.7077    
cufflinks 31.898 0.0 119.386 High High
cufflinks 13.414 0.0 53.4786    
cufflinks 9.78524 0.0 37.0682    
cufflinks 9.35764 0.0 27.4629    

0 Strain