Gene : Phvul.011G168700 P. vulgaris v2.1
Defline:  (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) Genomic Order:  1667
Name:  ? Phvul.011G168700 Secondary Identifier:  ? PAC:37157139
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G168700 0.5kb upstream 0.5kb upstream 6592 true Chr11: 47376641-47383232 Phaseolus vulgaris
Phvul.011G168700 0.5kb upstream 0.5kb upstream 500 false Chr11: 47376641-47377140 Phaseolus vulgaris
Phvul.011G168700 0.5kb downstream 0.5kb downstream 6592 true Chr11: 47377141-47383732 Phaseolus vulgaris
Phvul.011G168700 0.5kb downstream 0.5kb downstream 500 false Chr11: 47383233-47383732 Phaseolus vulgaris
Phvul.011G168700 1.0kb upstream 1.0kb upstream 7092 true Chr11: 47376141-47383232 Phaseolus vulgaris
Phvul.011G168700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 47376141-47377140 Phaseolus vulgaris
Phvul.011G168700 1.0kb downstream 1.0kb downstream 7092 true Chr11: 47377141-47384232 Phaseolus vulgaris
Phvul.011G168700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 47383233-47384232 Phaseolus vulgaris
Phvul.011G168700 2.0kb upstream 2.0kb upstream 8092 true Chr11: 47375141-47383232 Phaseolus vulgaris
Phvul.011G168700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 47375141-47377140 Phaseolus vulgaris
Phvul.011G168700 2.0kb downstream 2.0kb downstream 8092 true Chr11: 47377141-47385232 Phaseolus vulgaris
Phvul.011G168700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 47383233-47385232 Phaseolus vulgaris
Phvul.011G168700 5.0kb upstream 5.0kb upstream 11092 true Chr11: 47372141-47383232 Phaseolus vulgaris
Phvul.011G168700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 47372141-47377140 Phaseolus vulgaris
Phvul.011G168700 5.0kb downstream 5.0kb downstream 11092 true Chr11: 47377141-47388232 Phaseolus vulgaris
Phvul.011G168700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 47383233-47388232 Phaseolus vulgaris
Phvul.011G168700 10.0kb upstream 10.0kb upstream 16092 true Chr11: 47367141-47383232 Phaseolus vulgaris
Phvul.011G168700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 47367141-47377140 Phaseolus vulgaris
Phvul.011G168700 10.0kb downstream 10.0kb downstream 16092 true Chr11: 47377141-47393232 Phaseolus vulgaris
Phvul.011G168700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 47383233-47393232 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301235 5265 Fabidae View MSA
124065183 5270 Rosid View MSA
123752158 5271 Pentapetalae View MSA
122786923 5272 Eudicot View MSA
122042121 5273 Angiosperm View MSA
121345385 5274 Embryophyte View MSA
123428682 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.18216 0.0 12.0732    
cufflinks 1.81921 0.0 9.47854    
cufflinks 1.78589 0.0 9.62633    
cufflinks 0.639474 0.0 3.68827   Low
cufflinks 2.62637 0.0 12.5403   High
cufflinks 1.55758 0.0 7.0064    
cufflinks 2.20123 0.0 14.8762    
cufflinks 1.8461 0.0 8.00686    
cufflinks 1.89597 0.0 9.7726    
cufflinks 1.75654 0.0 9.27417    
cufflinks 2.14406 0.0 10.973    

0 Strain