Gene : Phvul.011G169400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22891:SF35 - PROTEIN ARGONAUTE 6 Genomic Order:  1691
Name:  ? Phvul.011G169400 Secondary Identifier:  ? PAC:37154794
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G169400 0.5kb upstream 0.5kb upstream 10540 true Chr11: 47717325-47727864 Phaseolus vulgaris
Phvul.011G169400 0.5kb upstream 0.5kb upstream 500 false Chr11: 47727365-47727864 Phaseolus vulgaris
Phvul.011G169400 0.5kb downstream 0.5kb downstream 10540 true Chr11: 47716825-47727364 Phaseolus vulgaris
Phvul.011G169400 0.5kb downstream 0.5kb downstream 500 false Chr11: 47716825-47717324 Phaseolus vulgaris
Phvul.011G169400 1.0kb upstream 1.0kb upstream 11040 true Chr11: 47717325-47728364 Phaseolus vulgaris
Phvul.011G169400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 47727365-47728364 Phaseolus vulgaris
Phvul.011G169400 1.0kb downstream 1.0kb downstream 11040 true Chr11: 47716325-47727364 Phaseolus vulgaris
Phvul.011G169400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 47716325-47717324 Phaseolus vulgaris
Phvul.011G169400 2.0kb upstream 2.0kb upstream 12040 true Chr11: 47717325-47729364 Phaseolus vulgaris
Phvul.011G169400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 47727365-47729364 Phaseolus vulgaris
Phvul.011G169400 2.0kb downstream 2.0kb downstream 12040 true Chr11: 47715325-47727364 Phaseolus vulgaris
Phvul.011G169400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 47715325-47717324 Phaseolus vulgaris
Phvul.011G169400 5.0kb upstream 5.0kb upstream 15040 true Chr11: 47717325-47732364 Phaseolus vulgaris
Phvul.011G169400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 47727365-47732364 Phaseolus vulgaris
Phvul.011G169400 5.0kb downstream 5.0kb downstream 15040 true Chr11: 47712325-47727364 Phaseolus vulgaris
Phvul.011G169400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 47712325-47717324 Phaseolus vulgaris
Phvul.011G169400 10.0kb upstream 10.0kb upstream 20040 true Chr11: 47717325-47737364 Phaseolus vulgaris
Phvul.011G169400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 47727365-47737364 Phaseolus vulgaris
Phvul.011G169400 10.0kb downstream 10.0kb downstream 20040 true Chr11: 47707325-47727364 Phaseolus vulgaris
Phvul.011G169400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 47707325-47717324 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027856 5273 Angiosperm View MSA
122306368 5265 Fabidae View MSA
124061938 5270 Rosid View MSA
123749458 5271 Pentapetalae View MSA
122795022 5272 Eudicot View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.848579 0.0 4.73441   Low
cufflinks 2.72324 0.0 12.8272    
cufflinks 1.62666 0.0 8.89046    
cufflinks 1.25457 0.0 8.17515   Low
cufflinks 2.65446 0.0 11.1785    
cufflinks 3.44744 0.0 13.373    
cufflinks 3.07756 0.0 16.2367    
cufflinks 4.83828 0.0 24.4542   High
cufflinks 1.97304 0.0 10.0317    
cufflinks 2.61 0.0 10.825    
cufflinks 1.99158 0.0 7.76117    

0 Strain