Gene : estExt_fgenesh2_pg.C_Chr_110066 M. sp RCC299 v3.0
Defline:  (1 of 14) PF00686 - Starch binding domain (CBM_20) Genomic Order:  104
Name:  ? estExt_fgenesh2_pg.C_Chr_110066 Secondary Identifier:  ? PAC:27405255
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MspRCC299 PWY-6724 Micromonas sp RCC299 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh2_pg.C_Chr_110066 0.5kb upstream 0.5kb upstream 2831 true Chr_11: 181905-184735 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 0.5kb upstream 0.5kb upstream 500 false Chr_11: 184236-184735 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 0.5kb downstream 0.5kb downstream 2831 true Chr_11: 181405-184235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 0.5kb downstream 0.5kb downstream 500 false Chr_11: 181405-181904 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 1.0kb upstream 1.0kb upstream 3331 true Chr_11: 181905-185235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 1.0kb upstream 1.0kb upstream 1000 false Chr_11: 184236-185235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 1.0kb downstream 1.0kb downstream 3331 true Chr_11: 180905-184235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 1.0kb downstream 1.0kb downstream 1000 false Chr_11: 180905-181904 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 2.0kb upstream 2.0kb upstream 4331 true Chr_11: 181905-186235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 2.0kb upstream 2.0kb upstream 2000 false Chr_11: 184236-186235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 2.0kb downstream 2.0kb downstream 4331 true Chr_11: 179905-184235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 2.0kb downstream 2.0kb downstream 2000 false Chr_11: 179905-181904 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 5.0kb upstream 5.0kb upstream 7331 true Chr_11: 181905-189235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 5.0kb upstream 5.0kb upstream 5000 false Chr_11: 184236-189235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 5.0kb downstream 5.0kb downstream 7331 true Chr_11: 176905-184235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 5.0kb downstream 5.0kb downstream 5000 false Chr_11: 176905-181904 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 10.0kb upstream 10.0kb upstream 12331 true Chr_11: 181905-194235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 10.0kb upstream 10.0kb upstream 10000 false Chr_11: 184236-194235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 10.0kb downstream 10.0kb downstream 12331 true Chr_11: 171905-184235 Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110066 10.0kb downstream 10.0kb downstream 10000 false Chr_11: 171905-181904 Micromonas sp RCC299

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110819 5260 Chlorophyte View MSA
123429164 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier