Gene : estExt_Genewise2.C_Chr_010528 M. sp RCC299 v3.0
Defline:  (1 of 1) 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  354
Name:  ? estExt_Genewise2.C_Chr_010528 Secondary Identifier:  ? PAC:27399372
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MspRCC299 ARO-PWY Micromonas sp RCC299 pathologic  
MspRCC299 PWY-6163 Micromonas sp RCC299 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genewise2.C_Chr_010528 0.5kb upstream 0.5kb upstream 4142 true Chr_01: 871874-876015 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 0.5kb upstream 0.5kb upstream 500 false Chr_01: 875516-876015 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 0.5kb downstream 0.5kb downstream 4142 true Chr_01: 871374-875515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 0.5kb downstream 0.5kb downstream 500 false Chr_01: 871374-871873 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 1.0kb upstream 1.0kb upstream 4642 true Chr_01: 871874-876515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 875516-876515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 1.0kb downstream 1.0kb downstream 4642 true Chr_01: 870874-875515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 870874-871873 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 2.0kb upstream 2.0kb upstream 5642 true Chr_01: 871874-877515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 875516-877515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 2.0kb downstream 2.0kb downstream 5642 true Chr_01: 869874-875515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 869874-871873 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 5.0kb upstream 5.0kb upstream 8642 true Chr_01: 871874-880515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 875516-880515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 5.0kb downstream 5.0kb downstream 8642 true Chr_01: 866874-875515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 866874-871873 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 10.0kb upstream 10.0kb upstream 13642 true Chr_01: 871874-885515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 875516-885515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 10.0kb downstream 10.0kb downstream 13642 true Chr_01: 861874-875515 Micromonas sp RCC299
estExt_Genewise2.C_Chr_010528 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 861874-871873 Micromonas sp RCC299

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109656 5260 Chlorophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier