Gene : est_orfs.Chr_01_1195_3200096:1 M. sp RCC299 v3.0
Defline:  (1 of 2) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  227
Name:  ? est_orfs.Chr_01_1195_3200096:1 Secondary Identifier:  ? PAC:27399010
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MspRCC299 PWY-6689 Micromonas sp RCC299 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
est_orfs.Chr_01_1195_3200096:1 0.5kb upstream 0.5kb upstream 2311 true Chr_01: 540317-542627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 0.5kb upstream 0.5kb upstream 500 false Chr_01: 540317-540816 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 0.5kb downstream 0.5kb downstream 2311 true Chr_01: 540817-543127 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 0.5kb downstream 0.5kb downstream 500 false Chr_01: 542628-543127 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 1.0kb upstream 1.0kb upstream 2811 true Chr_01: 539817-542627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 539817-540816 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 1.0kb downstream 1.0kb downstream 2811 true Chr_01: 540817-543627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 542628-543627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 2.0kb upstream 2.0kb upstream 3811 true Chr_01: 538817-542627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 538817-540816 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 2.0kb downstream 2.0kb downstream 3811 true Chr_01: 540817-544627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 542628-544627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 5.0kb upstream 5.0kb upstream 6811 true Chr_01: 535817-542627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 535817-540816 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 5.0kb downstream 5.0kb downstream 6811 true Chr_01: 540817-547627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 542628-547627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 10.0kb upstream 10.0kb upstream 11811 true Chr_01: 530817-542627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 530817-540816 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 10.0kb downstream 10.0kb downstream 11811 true Chr_01: 540817-552627 Micromonas sp RCC299
est_orfs.Chr_01_1195_3200096:1 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 542628-552627 Micromonas sp RCC299

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111307 5260 Chlorophyte View MSA
123429143 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier