Gene : Zm00008a000175 Z. mays PH207 v1.1
Defline:  (1 of 2) PTHR12358:SF43 - SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  175
Name:  ? Zm00008a000175 Secondary Identifier:  ? PAC:37202450
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
ZmaysPH207 PWY-7039 Zea mays PH207 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a000175 0.5kb upstream 0.5kb upstream 4053 true chr01: 5465320-5469372 Zea mays PH207
Zm00008a000175 0.5kb upstream 0.5kb upstream 500 false chr01: 5465320-5465819 Zea mays PH207
Zm00008a000175 0.5kb downstream 0.5kb downstream 4053 true chr01: 5465820-5469872 Zea mays PH207
Zm00008a000175 0.5kb downstream 0.5kb downstream 500 false chr01: 5469373-5469872 Zea mays PH207
Zm00008a000175 1.0kb upstream 1.0kb upstream 4553 true chr01: 5464820-5469372 Zea mays PH207
Zm00008a000175 1.0kb upstream 1.0kb upstream 1000 false chr01: 5464820-5465819 Zea mays PH207
Zm00008a000175 1.0kb downstream 1.0kb downstream 4553 true chr01: 5465820-5470372 Zea mays PH207
Zm00008a000175 1.0kb downstream 1.0kb downstream 1000 false chr01: 5469373-5470372 Zea mays PH207
Zm00008a000175 2.0kb upstream 2.0kb upstream 5553 true chr01: 5463820-5469372 Zea mays PH207
Zm00008a000175 2.0kb upstream 2.0kb upstream 2000 false chr01: 5463820-5465819 Zea mays PH207
Zm00008a000175 2.0kb downstream 2.0kb downstream 5553 true chr01: 5465820-5471372 Zea mays PH207
Zm00008a000175 2.0kb downstream 2.0kb downstream 2000 false chr01: 5469373-5471372 Zea mays PH207
Zm00008a000175 5.0kb upstream 5.0kb upstream 8553 true chr01: 5460820-5469372 Zea mays PH207
Zm00008a000175 5.0kb upstream 5.0kb upstream 5000 false chr01: 5460820-5465819 Zea mays PH207
Zm00008a000175 5.0kb downstream 5.0kb downstream 8553 true chr01: 5465820-5474372 Zea mays PH207
Zm00008a000175 5.0kb downstream 5.0kb downstream 5000 false chr01: 5469373-5474372 Zea mays PH207
Zm00008a000175 10.0kb upstream 10.0kb upstream 13553 true chr01: 5455820-5469372 Zea mays PH207
Zm00008a000175 10.0kb upstream 10.0kb upstream 10000 false chr01: 5455820-5465819 Zea mays PH207
Zm00008a000175 10.0kb downstream 10.0kb downstream 13553 true chr01: 5465820-5479372 Zea mays PH207
Zm00008a000175 10.0kb downstream 10.0kb downstream 10000 false chr01: 5469373-5479372 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197669 5267 Panicoideae View MSA
124573457 5269 Grass View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier