Gene : Zm00008a015600 Z. mays PH207 v1.1
Defline:  (1 of 2) K01696 - tryptophan synthase beta chain (trpB) Genomic Order:  761
Name:  ? Zm00008a015600 Secondary Identifier:  ? PAC:37196600
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
ZmaysPH207 PWY-4161 Zea mays PH207 pathologic  
ZmaysPH207 PWY-6949 Zea mays PH207 pathologic  
ZmaysPH207 TRPSYN-PWY Zea mays PH207 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a015600 0.5kb upstream 0.5kb upstream 7314 true chr04: 35387008-35394321 Zea mays PH207
Zm00008a015600 0.5kb upstream 0.5kb upstream 500 false chr04: 35393822-35394321 Zea mays PH207
Zm00008a015600 0.5kb downstream 0.5kb downstream 7314 true chr04: 35386508-35393821 Zea mays PH207
Zm00008a015600 0.5kb downstream 0.5kb downstream 500 false chr04: 35386508-35387007 Zea mays PH207
Zm00008a015600 1.0kb upstream 1.0kb upstream 7814 true chr04: 35387008-35394821 Zea mays PH207
Zm00008a015600 1.0kb upstream 1.0kb upstream 1000 false chr04: 35393822-35394821 Zea mays PH207
Zm00008a015600 1.0kb downstream 1.0kb downstream 7814 true chr04: 35386008-35393821 Zea mays PH207
Zm00008a015600 1.0kb downstream 1.0kb downstream 1000 false chr04: 35386008-35387007 Zea mays PH207
Zm00008a015600 2.0kb upstream 2.0kb upstream 8814 true chr04: 35387008-35395821 Zea mays PH207
Zm00008a015600 2.0kb upstream 2.0kb upstream 2000 false chr04: 35393822-35395821 Zea mays PH207
Zm00008a015600 2.0kb downstream 2.0kb downstream 8814 true chr04: 35385008-35393821 Zea mays PH207
Zm00008a015600 2.0kb downstream 2.0kb downstream 2000 false chr04: 35385008-35387007 Zea mays PH207
Zm00008a015600 5.0kb upstream 5.0kb upstream 11814 true chr04: 35387008-35398821 Zea mays PH207
Zm00008a015600 5.0kb upstream 5.0kb upstream 5000 false chr04: 35393822-35398821 Zea mays PH207
Zm00008a015600 5.0kb downstream 5.0kb downstream 11814 true chr04: 35382008-35393821 Zea mays PH207
Zm00008a015600 5.0kb downstream 5.0kb downstream 5000 false chr04: 35382008-35387007 Zea mays PH207
Zm00008a015600 10.0kb upstream 10.0kb upstream 16814 true chr04: 35387008-35403821 Zea mays PH207
Zm00008a015600 10.0kb upstream 10.0kb upstream 10000 false chr04: 35393822-35403821 Zea mays PH207
Zm00008a015600 10.0kb downstream 10.0kb downstream 16814 true chr04: 35377008-35393821 Zea mays PH207
Zm00008a015600 10.0kb downstream 10.0kb downstream 10000 false chr04: 35377008-35387007 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191160 5267 Panicoideae View MSA
124577172 5269 Grass View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier