Gene : Zm00008a037742 Z. mays PH207 v1.1
Defline:  (1 of 14) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1475
Name:  ? Zm00008a037742 Secondary Identifier:  ? PAC:37186985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a037742 0.5kb upstream 0.5kb upstream 4753 true chr10: 105717374-105722126 Zea mays PH207
Zm00008a037742 0.5kb upstream 0.5kb upstream 500 false chr10: 105721627-105722126 Zea mays PH207
Zm00008a037742 0.5kb downstream 0.5kb downstream 4753 true chr10: 105716874-105721626 Zea mays PH207
Zm00008a037742 0.5kb downstream 0.5kb downstream 500 false chr10: 105716874-105717373 Zea mays PH207
Zm00008a037742 1.0kb upstream 1.0kb upstream 5253 true chr10: 105717374-105722626 Zea mays PH207
Zm00008a037742 1.0kb upstream 1.0kb upstream 1000 false chr10: 105721627-105722626 Zea mays PH207
Zm00008a037742 1.0kb downstream 1.0kb downstream 5253 true chr10: 105716374-105721626 Zea mays PH207
Zm00008a037742 1.0kb downstream 1.0kb downstream 1000 false chr10: 105716374-105717373 Zea mays PH207
Zm00008a037742 2.0kb upstream 2.0kb upstream 6253 true chr10: 105717374-105723626 Zea mays PH207
Zm00008a037742 2.0kb upstream 2.0kb upstream 2000 false chr10: 105721627-105723626 Zea mays PH207
Zm00008a037742 2.0kb downstream 2.0kb downstream 6253 true chr10: 105715374-105721626 Zea mays PH207
Zm00008a037742 2.0kb downstream 2.0kb downstream 2000 false chr10: 105715374-105717373 Zea mays PH207
Zm00008a037742 5.0kb upstream 5.0kb upstream 9253 true chr10: 105717374-105726626 Zea mays PH207
Zm00008a037742 5.0kb upstream 5.0kb upstream 5000 false chr10: 105721627-105726626 Zea mays PH207
Zm00008a037742 5.0kb downstream 5.0kb downstream 9253 true chr10: 105712374-105721626 Zea mays PH207
Zm00008a037742 5.0kb downstream 5.0kb downstream 5000 false chr10: 105712374-105717373 Zea mays PH207
Zm00008a037742 10.0kb upstream 10.0kb upstream 14253 true chr10: 105717374-105731626 Zea mays PH207
Zm00008a037742 10.0kb upstream 10.0kb upstream 10000 false chr10: 105721627-105731626 Zea mays PH207
Zm00008a037742 10.0kb downstream 10.0kb downstream 14253 true chr10: 105707374-105721626 Zea mays PH207
Zm00008a037742 10.0kb downstream 10.0kb downstream 10000 false chr10: 105707374-105717373 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185269 5267 Panicoideae View MSA
124573617 5269 Grass View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier