Gene : Zm00008a039051 Z. mays PH207 v1.1
Defline:  (1 of 44) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Genomic Order:  112
Name:  ? Zm00008a039051 Secondary Identifier:  ? PAC:37215919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a039051 0.5kb upstream 0.5kb upstream 3358 true chrUNKNOWN: 854290-857647 Zea mays PH207
Zm00008a039051 0.5kb upstream 0.5kb upstream 500 false chrUNKNOWN: 857148-857647 Zea mays PH207
Zm00008a039051 0.5kb downstream 0.5kb downstream 3358 true chrUNKNOWN: 853790-857147 Zea mays PH207
Zm00008a039051 0.5kb downstream 0.5kb downstream 500 false chrUNKNOWN: 853790-854289 Zea mays PH207
Zm00008a039051 1.0kb upstream 1.0kb upstream 3858 true chrUNKNOWN: 854290-858147 Zea mays PH207
Zm00008a039051 1.0kb upstream 1.0kb upstream 1000 false chrUNKNOWN: 857148-858147 Zea mays PH207
Zm00008a039051 1.0kb downstream 1.0kb downstream 3858 true chrUNKNOWN: 853290-857147 Zea mays PH207
Zm00008a039051 1.0kb downstream 1.0kb downstream 1000 false chrUNKNOWN: 853290-854289 Zea mays PH207
Zm00008a039051 2.0kb upstream 2.0kb upstream 4858 true chrUNKNOWN: 854290-859147 Zea mays PH207
Zm00008a039051 2.0kb upstream 2.0kb upstream 2000 false chrUNKNOWN: 857148-859147 Zea mays PH207
Zm00008a039051 2.0kb downstream 2.0kb downstream 4858 true chrUNKNOWN: 852290-857147 Zea mays PH207
Zm00008a039051 2.0kb downstream 2.0kb downstream 2000 false chrUNKNOWN: 852290-854289 Zea mays PH207
Zm00008a039051 5.0kb upstream 5.0kb upstream 7858 true chrUNKNOWN: 854290-862147 Zea mays PH207
Zm00008a039051 5.0kb upstream 5.0kb upstream 5000 false chrUNKNOWN: 857148-862147 Zea mays PH207
Zm00008a039051 5.0kb downstream 5.0kb downstream 7858 true chrUNKNOWN: 849290-857147 Zea mays PH207
Zm00008a039051 5.0kb downstream 5.0kb downstream 5000 false chrUNKNOWN: 849290-854289 Zea mays PH207
Zm00008a039051 10.0kb upstream 10.0kb upstream 12858 true chrUNKNOWN: 854290-867147 Zea mays PH207
Zm00008a039051 10.0kb upstream 10.0kb upstream 10000 false chrUNKNOWN: 857148-867147 Zea mays PH207
Zm00008a039051 10.0kb downstream 10.0kb downstream 12858 true chrUNKNOWN: 844290-857147 Zea mays PH207
Zm00008a039051 10.0kb downstream 10.0kb downstream 10000 false chrUNKNOWN: 844290-854289 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121850383 5273 Angiosperm Singleton cluster - no MSA
122125882 5267 Panicoideae Singleton cluster - no MSA
124419298 5269 Grass Singleton cluster - no MSA
121121064 5274 Embryophyte Singleton cluster - no MSA
123160189 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier