Gene : Potri.001G008800 P. trichocarpa v3.1
Defline:  (1 of 3) K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) Genomic Order:  89
Name:  ? Potri.001G008800 Secondary Identifier:  ? PAC:37273884
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G008800 0.5kb upstream 0.5kb upstream 8395 true Chr01: 573656-582050 Populus trichocarpa
Potri.001G008800 0.5kb upstream 0.5kb upstream 500 false Chr01: 581551-582050 Populus trichocarpa
Potri.001G008800 0.5kb downstream 0.5kb downstream 8395 true Chr01: 573156-581550 Populus trichocarpa
Potri.001G008800 0.5kb downstream 0.5kb downstream 500 false Chr01: 573156-573655 Populus trichocarpa
Potri.001G008800 1.0kb upstream 1.0kb upstream 8895 true Chr01: 573656-582550 Populus trichocarpa
Potri.001G008800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 581551-582550 Populus trichocarpa
Potri.001G008800 1.0kb downstream 1.0kb downstream 8895 true Chr01: 572656-581550 Populus trichocarpa
Potri.001G008800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 572656-573655 Populus trichocarpa
Potri.001G008800 2.0kb upstream 2.0kb upstream 9895 true Chr01: 573656-583550 Populus trichocarpa
Potri.001G008800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 581551-583550 Populus trichocarpa
Potri.001G008800 2.0kb downstream 2.0kb downstream 9895 true Chr01: 571656-581550 Populus trichocarpa
Potri.001G008800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 571656-573655 Populus trichocarpa
Potri.001G008800 5.0kb upstream 5.0kb upstream 12895 true Chr01: 573656-586550 Populus trichocarpa
Potri.001G008800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 581551-586550 Populus trichocarpa
Potri.001G008800 5.0kb downstream 5.0kb downstream 12895 true Chr01: 568656-581550 Populus trichocarpa
Potri.001G008800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 568656-573655 Populus trichocarpa
Potri.001G008800 10.0kb upstream 10.0kb upstream 17895 true Chr01: 573656-591550 Populus trichocarpa
Potri.001G008800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 581551-591550 Populus trichocarpa
Potri.001G008800 10.0kb downstream 10.0kb downstream 17895 true Chr01: 563656-581550 Populus trichocarpa
Potri.001G008800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 563656-573655 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450998 5262 Malpighiales View MSA
124238716 5268 Malvidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain