Gene : Potri.001G012200 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR12741:SF21 - CALLOSE SYNTHASE 3 Genomic Order:  122
Name:  ? Potri.001G012200 Secondary Identifier:  ? PAC:37273676
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6773 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G012200 0.5kb upstream 0.5kb upstream 16429 true Chr01: 806419-822847 Populus trichocarpa
Potri.001G012200 0.5kb upstream 0.5kb upstream 500 false Chr01: 822348-822847 Populus trichocarpa
Potri.001G012200 0.5kb downstream 0.5kb downstream 16429 true Chr01: 805919-822347 Populus trichocarpa
Potri.001G012200 0.5kb downstream 0.5kb downstream 500 false Chr01: 805919-806418 Populus trichocarpa
Potri.001G012200 1.0kb upstream 1.0kb upstream 16929 true Chr01: 806419-823347 Populus trichocarpa
Potri.001G012200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 822348-823347 Populus trichocarpa
Potri.001G012200 1.0kb downstream 1.0kb downstream 16929 true Chr01: 805419-822347 Populus trichocarpa
Potri.001G012200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 805419-806418 Populus trichocarpa
Potri.001G012200 2.0kb upstream 2.0kb upstream 17929 true Chr01: 806419-824347 Populus trichocarpa
Potri.001G012200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 822348-824347 Populus trichocarpa
Potri.001G012200 2.0kb downstream 2.0kb downstream 17929 true Chr01: 804419-822347 Populus trichocarpa
Potri.001G012200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 804419-806418 Populus trichocarpa
Potri.001G012200 5.0kb upstream 5.0kb upstream 20929 true Chr01: 806419-827347 Populus trichocarpa
Potri.001G012200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 822348-827347 Populus trichocarpa
Potri.001G012200 5.0kb downstream 5.0kb downstream 20929 true Chr01: 801419-822347 Populus trichocarpa
Potri.001G012200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 801419-806418 Populus trichocarpa
Potri.001G012200 10.0kb upstream 10.0kb upstream 25929 true Chr01: 806419-832347 Populus trichocarpa
Potri.001G012200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 822348-832347 Populus trichocarpa
Potri.001G012200 10.0kb downstream 10.0kb downstream 25929 true Chr01: 796419-822347 Populus trichocarpa
Potri.001G012200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 796419-806418 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452505 5262 Malpighiales View MSA
124251802 5268 Malvidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain