Gene : Potri.001G003900 P. trichocarpa v3.1
Defline:  (1 of 2) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 Genomic Order:  38
Name:  ? Potri.001G003900 Secondary Identifier:  ? PAC:37279138
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G003900 0.5kb upstream 0.5kb upstream 15546 true Chr01: 229477-245022 Populus trichocarpa
Potri.001G003900 0.5kb upstream 0.5kb upstream 500 false Chr01: 229477-229976 Populus trichocarpa
Potri.001G003900 0.5kb downstream 0.5kb downstream 15546 true Chr01: 229977-245522 Populus trichocarpa
Potri.001G003900 0.5kb downstream 0.5kb downstream 500 false Chr01: 245023-245522 Populus trichocarpa
Potri.001G003900 1.0kb upstream 1.0kb upstream 16046 true Chr01: 228977-245022 Populus trichocarpa
Potri.001G003900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 228977-229976 Populus trichocarpa
Potri.001G003900 1.0kb downstream 1.0kb downstream 16046 true Chr01: 229977-246022 Populus trichocarpa
Potri.001G003900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 245023-246022 Populus trichocarpa
Potri.001G003900 2.0kb upstream 2.0kb upstream 17046 true Chr01: 227977-245022 Populus trichocarpa
Potri.001G003900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 227977-229976 Populus trichocarpa
Potri.001G003900 2.0kb downstream 2.0kb downstream 17046 true Chr01: 229977-247022 Populus trichocarpa
Potri.001G003900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 245023-247022 Populus trichocarpa
Potri.001G003900 5.0kb upstream 5.0kb upstream 20046 true Chr01: 224977-245022 Populus trichocarpa
Potri.001G003900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 224977-229976 Populus trichocarpa
Potri.001G003900 5.0kb downstream 5.0kb downstream 20046 true Chr01: 229977-250022 Populus trichocarpa
Potri.001G003900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 245023-250022 Populus trichocarpa
Potri.001G003900 10.0kb upstream 10.0kb upstream 25046 true Chr01: 219977-245022 Populus trichocarpa
Potri.001G003900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 219977-229976 Populus trichocarpa
Potri.001G003900 10.0kb downstream 10.0kb downstream 25046 true Chr01: 229977-255022 Populus trichocarpa
Potri.001G003900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 245023-255022 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427285 5262 Malpighiales View MSA
124238685 5268 Malvidae View MSA
124067858 5270 Rosid View MSA
123739465 5271 Pentapetalae View MSA
122788693 5272 Eudicot View MSA
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain