Gene : Potri.001G057500 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR12612:SF0 - NUCLEAR TRANSPORT FACTOR 2 Genomic Order:  596
Name:  ? Potri.001G057500 Secondary Identifier:  ? PAC:37278688

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G057500 0.5kb upstream 0.5kb upstream 5188 true Chr01: 4377284-4382471 Populus trichocarpa
Potri.001G057500 0.5kb upstream 0.5kb upstream 500 false Chr01: 4377284-4377783 Populus trichocarpa
Potri.001G057500 0.5kb downstream 0.5kb downstream 5188 true Chr01: 4377784-4382971 Populus trichocarpa
Potri.001G057500 0.5kb downstream 0.5kb downstream 500 false Chr01: 4382472-4382971 Populus trichocarpa
Potri.001G057500 1.0kb upstream 1.0kb upstream 5688 true Chr01: 4376784-4382471 Populus trichocarpa
Potri.001G057500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4376784-4377783 Populus trichocarpa
Potri.001G057500 1.0kb downstream 1.0kb downstream 5688 true Chr01: 4377784-4383471 Populus trichocarpa
Potri.001G057500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4382472-4383471 Populus trichocarpa
Potri.001G057500 2.0kb upstream 2.0kb upstream 6688 true Chr01: 4375784-4382471 Populus trichocarpa
Potri.001G057500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4375784-4377783 Populus trichocarpa
Potri.001G057500 2.0kb downstream 2.0kb downstream 6688 true Chr01: 4377784-4384471 Populus trichocarpa
Potri.001G057500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4382472-4384471 Populus trichocarpa
Potri.001G057500 5.0kb upstream 5.0kb upstream 9688 true Chr01: 4372784-4382471 Populus trichocarpa
Potri.001G057500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4372784-4377783 Populus trichocarpa
Potri.001G057500 5.0kb downstream 5.0kb downstream 9688 true Chr01: 4377784-4387471 Populus trichocarpa
Potri.001G057500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4382472-4387471 Populus trichocarpa
Potri.001G057500 10.0kb upstream 10.0kb upstream 14688 true Chr01: 4367784-4382471 Populus trichocarpa
Potri.001G057500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4367784-4377783 Populus trichocarpa
Potri.001G057500 10.0kb downstream 10.0kb downstream 14688 true Chr01: 4377784-4392471 Populus trichocarpa
Potri.001G057500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4382472-4392471 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426307 5262 Malpighiales View MSA
124239660 5268 Malvidae View MSA
124073712 5270 Rosid View MSA
123736985 5271 Pentapetalae View MSA
122797054 5272 Eudicot View MSA
122051393 5273 Angiosperm View MSA
121351051 5274 Embryophyte View MSA
123427249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain