Gene : Potri.001G049100 P. trichocarpa v3.1
Defline:  (1 of 1) 5.4.99.40 - Alpha-amyrin synthase / 2,3-oxidosqualene alpha-amyrin cyclase Genomic Order:  509
Name:  ? Potri.001G049100 Secondary Identifier:  ? PAC:37279666
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5203 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5377 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G049100 0.5kb upstream 0.5kb upstream 6392 true Chr01: 3703210-3709601 Populus trichocarpa
Potri.001G049100 0.5kb upstream 0.5kb upstream 500 false Chr01: 3709102-3709601 Populus trichocarpa
Potri.001G049100 0.5kb downstream 0.5kb downstream 6392 true Chr01: 3702710-3709101 Populus trichocarpa
Potri.001G049100 0.5kb downstream 0.5kb downstream 500 false Chr01: 3702710-3703209 Populus trichocarpa
Potri.001G049100 1.0kb upstream 1.0kb upstream 6892 true Chr01: 3703210-3710101 Populus trichocarpa
Potri.001G049100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3709102-3710101 Populus trichocarpa
Potri.001G049100 1.0kb downstream 1.0kb downstream 6892 true Chr01: 3702210-3709101 Populus trichocarpa
Potri.001G049100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3702210-3703209 Populus trichocarpa
Potri.001G049100 2.0kb upstream 2.0kb upstream 7892 true Chr01: 3703210-3711101 Populus trichocarpa
Potri.001G049100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3709102-3711101 Populus trichocarpa
Potri.001G049100 2.0kb downstream 2.0kb downstream 7892 true Chr01: 3701210-3709101 Populus trichocarpa
Potri.001G049100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3701210-3703209 Populus trichocarpa
Potri.001G049100 5.0kb upstream 5.0kb upstream 10892 true Chr01: 3703210-3714101 Populus trichocarpa
Potri.001G049100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3709102-3714101 Populus trichocarpa
Potri.001G049100 5.0kb downstream 5.0kb downstream 10892 true Chr01: 3698210-3709101 Populus trichocarpa
Potri.001G049100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3698210-3703209 Populus trichocarpa
Potri.001G049100 10.0kb upstream 10.0kb upstream 15892 true Chr01: 3703210-3719101 Populus trichocarpa
Potri.001G049100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3709102-3719101 Populus trichocarpa
Potri.001G049100 10.0kb downstream 10.0kb downstream 15892 true Chr01: 3693210-3709101 Populus trichocarpa
Potri.001G049100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3693210-3703209 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
122459632 5262 Malpighiales View MSA
124245550 5268 Malvidae View MSA
124052067 5270 Rosid View MSA
123750414 5271 Pentapetalae View MSA
122773643 5272 Eudicot View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain