Gene : Potri.001G053100 P. trichocarpa v3.1
Defline:  (1 of 27) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Genomic Order:  550
Name:  ? Potri.001G053100 Secondary Identifier:  ? PAC:37279496
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G053100 0.5kb upstream 0.5kb upstream 1320 true Chr01: 4049263-4050582 Populus trichocarpa
Potri.001G053100 0.5kb upstream 0.5kb upstream 500 false Chr01: 4049263-4049762 Populus trichocarpa
Potri.001G053100 0.5kb downstream 0.5kb downstream 1320 true Chr01: 4049763-4051082 Populus trichocarpa
Potri.001G053100 0.5kb downstream 0.5kb downstream 500 false Chr01: 4050583-4051082 Populus trichocarpa
Potri.001G053100 1.0kb upstream 1.0kb upstream 1820 true Chr01: 4048763-4050582 Populus trichocarpa
Potri.001G053100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4048763-4049762 Populus trichocarpa
Potri.001G053100 1.0kb downstream 1.0kb downstream 1820 true Chr01: 4049763-4051582 Populus trichocarpa
Potri.001G053100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4050583-4051582 Populus trichocarpa
Potri.001G053100 2.0kb upstream 2.0kb upstream 2820 true Chr01: 4047763-4050582 Populus trichocarpa
Potri.001G053100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4047763-4049762 Populus trichocarpa
Potri.001G053100 2.0kb downstream 2.0kb downstream 2820 true Chr01: 4049763-4052582 Populus trichocarpa
Potri.001G053100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4050583-4052582 Populus trichocarpa
Potri.001G053100 5.0kb upstream 5.0kb upstream 5820 true Chr01: 4044763-4050582 Populus trichocarpa
Potri.001G053100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4044763-4049762 Populus trichocarpa
Potri.001G053100 5.0kb downstream 5.0kb downstream 5820 true Chr01: 4049763-4055582 Populus trichocarpa
Potri.001G053100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4050583-4055582 Populus trichocarpa
Potri.001G053100 10.0kb upstream 10.0kb upstream 10820 true Chr01: 4039763-4050582 Populus trichocarpa
Potri.001G053100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4039763-4049762 Populus trichocarpa
Potri.001G053100 10.0kb downstream 10.0kb downstream 10820 true Chr01: 4049763-4060582 Populus trichocarpa
Potri.001G053100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4050583-4060582 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464502 5262 Malpighiales View MSA
124253811 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain