Gene : Potri.001G140200 P. trichocarpa v3.1

Defline:  (1 of 7) KOG3140 - Predicted membrane protein Genomic Order:  1448
Name:  ? Potri.001G140200 Secondary Identifier:  ? PAC:37275105

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G140200 0.5kb upstream 0.5kb upstream 3098 true Chr01: 11286426-11289523 Populus trichocarpa
Potri.001G140200 0.5kb upstream 0.5kb upstream 500 false Chr01: 11286426-11286925 Populus trichocarpa
Potri.001G140200 0.5kb downstream 0.5kb downstream 3098 true Chr01: 11286926-11290023 Populus trichocarpa
Potri.001G140200 0.5kb downstream 0.5kb downstream 500 false Chr01: 11289524-11290023 Populus trichocarpa
Potri.001G140200 1.0kb upstream 1.0kb upstream 3598 true Chr01: 11285926-11289523 Populus trichocarpa
Potri.001G140200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11285926-11286925 Populus trichocarpa
Potri.001G140200 1.0kb downstream 1.0kb downstream 3598 true Chr01: 11286926-11290523 Populus trichocarpa
Potri.001G140200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11289524-11290523 Populus trichocarpa
Potri.001G140200 2.0kb upstream 2.0kb upstream 4598 true Chr01: 11284926-11289523 Populus trichocarpa
Potri.001G140200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11284926-11286925 Populus trichocarpa
Potri.001G140200 2.0kb downstream 2.0kb downstream 4598 true Chr01: 11286926-11291523 Populus trichocarpa
Potri.001G140200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11289524-11291523 Populus trichocarpa
Potri.001G140200 5.0kb upstream 5.0kb upstream 7598 true Chr01: 11281926-11289523 Populus trichocarpa
Potri.001G140200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11281926-11286925 Populus trichocarpa
Potri.001G140200 5.0kb downstream 5.0kb downstream 7598 true Chr01: 11286926-11294523 Populus trichocarpa
Potri.001G140200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11289524-11294523 Populus trichocarpa
Potri.001G140200 10.0kb upstream 10.0kb upstream 12598 true Chr01: 11276926-11289523 Populus trichocarpa
Potri.001G140200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11276926-11286925 Populus trichocarpa
Potri.001G140200 10.0kb downstream 10.0kb downstream 12598 true Chr01: 11286926-11299523 Populus trichocarpa
Potri.001G140200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11289524-11299523 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452697 5262 Malpighiales View MSA
124253931 5268 Malvidae View MSA
124068758 5270 Rosid View MSA
123751002 5271 Pentapetalae View MSA
122793414 5272 Eudicot View MSA
122043784 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain