Gene : Potri.001G131000 P. trichocarpa v3.1

Defline:  (1 of 4) K02873 - large subunit ribosomal protein L13e (RP-L13e, RPL13) Genomic Order:  1356
Name:  ? Potri.001G131000 Secondary Identifier:  ? PAC:37276613

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G131000 0.5kb upstream 0.5kb upstream 3276 true Chr01: 10548952-10552227 Populus trichocarpa
Potri.001G131000 0.5kb upstream 0.5kb upstream 500 false Chr01: 10548952-10549451 Populus trichocarpa
Potri.001G131000 0.5kb downstream 0.5kb downstream 3276 true Chr01: 10549452-10552727 Populus trichocarpa
Potri.001G131000 0.5kb downstream 0.5kb downstream 500 false Chr01: 10552228-10552727 Populus trichocarpa
Potri.001G131000 1.0kb upstream 1.0kb upstream 3776 true Chr01: 10548452-10552227 Populus trichocarpa
Potri.001G131000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10548452-10549451 Populus trichocarpa
Potri.001G131000 1.0kb downstream 1.0kb downstream 3776 true Chr01: 10549452-10553227 Populus trichocarpa
Potri.001G131000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10552228-10553227 Populus trichocarpa
Potri.001G131000 2.0kb upstream 2.0kb upstream 4776 true Chr01: 10547452-10552227 Populus trichocarpa
Potri.001G131000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10547452-10549451 Populus trichocarpa
Potri.001G131000 2.0kb downstream 2.0kb downstream 4776 true Chr01: 10549452-10554227 Populus trichocarpa
Potri.001G131000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10552228-10554227 Populus trichocarpa
Potri.001G131000 5.0kb upstream 5.0kb upstream 7776 true Chr01: 10544452-10552227 Populus trichocarpa
Potri.001G131000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10544452-10549451 Populus trichocarpa
Potri.001G131000 5.0kb downstream 5.0kb downstream 7776 true Chr01: 10549452-10557227 Populus trichocarpa
Potri.001G131000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10552228-10557227 Populus trichocarpa
Potri.001G131000 10.0kb upstream 10.0kb upstream 12776 true Chr01: 10539452-10552227 Populus trichocarpa
Potri.001G131000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10539452-10549451 Populus trichocarpa
Potri.001G131000 10.0kb downstream 10.0kb downstream 12776 true Chr01: 10549452-10562227 Populus trichocarpa
Potri.001G131000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10552228-10562227 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448200 5262 Malpighiales View MSA
124242702 5268 Malvidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain