Gene : Potri.001G115500 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  1199
Name:  ? Potri.001G115500 Secondary Identifier:  ? PAC:37276775
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G115500 0.5kb upstream 0.5kb upstream 2982 true Chr01: 9240591-9243572 Populus trichocarpa
Potri.001G115500 0.5kb upstream 0.5kb upstream 500 false Chr01: 9243073-9243572 Populus trichocarpa
Potri.001G115500 0.5kb downstream 0.5kb downstream 2982 true Chr01: 9240091-9243072 Populus trichocarpa
Potri.001G115500 0.5kb downstream 0.5kb downstream 500 false Chr01: 9240091-9240590 Populus trichocarpa
Potri.001G115500 1.0kb upstream 1.0kb upstream 3482 true Chr01: 9240591-9244072 Populus trichocarpa
Potri.001G115500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9243073-9244072 Populus trichocarpa
Potri.001G115500 1.0kb downstream 1.0kb downstream 3482 true Chr01: 9239591-9243072 Populus trichocarpa
Potri.001G115500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9239591-9240590 Populus trichocarpa
Potri.001G115500 2.0kb upstream 2.0kb upstream 4482 true Chr01: 9240591-9245072 Populus trichocarpa
Potri.001G115500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9243073-9245072 Populus trichocarpa
Potri.001G115500 2.0kb downstream 2.0kb downstream 4482 true Chr01: 9238591-9243072 Populus trichocarpa
Potri.001G115500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9238591-9240590 Populus trichocarpa
Potri.001G115500 5.0kb upstream 5.0kb upstream 7482 true Chr01: 9240591-9248072 Populus trichocarpa
Potri.001G115500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9243073-9248072 Populus trichocarpa
Potri.001G115500 5.0kb downstream 5.0kb downstream 7482 true Chr01: 9235591-9243072 Populus trichocarpa
Potri.001G115500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9235591-9240590 Populus trichocarpa
Potri.001G115500 10.0kb upstream 10.0kb upstream 12482 true Chr01: 9240591-9253072 Populus trichocarpa
Potri.001G115500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9243073-9253072 Populus trichocarpa
Potri.001G115500 10.0kb downstream 10.0kb downstream 12482 true Chr01: 9230591-9243072 Populus trichocarpa
Potri.001G115500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9230591-9240590 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456161 5262 Malpighiales View MSA
124252123 5268 Malvidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain