Gene : Potri.001G119200 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  1236
Name:  ? Potri.001G119200 Secondary Identifier:  ? PAC:37274003
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G119200 0.5kb upstream 0.5kb upstream 785 true Chr01: 9565980-9566764 Populus trichocarpa
Potri.001G119200 0.5kb upstream 0.5kb upstream 500 false Chr01: 9565980-9566479 Populus trichocarpa
Potri.001G119200 0.5kb downstream 0.5kb downstream 785 true Chr01: 9566480-9567264 Populus trichocarpa
Potri.001G119200 0.5kb downstream 0.5kb downstream 500 false Chr01: 9566765-9567264 Populus trichocarpa
Potri.001G119200 1.0kb upstream 1.0kb upstream 1285 true Chr01: 9565480-9566764 Populus trichocarpa
Potri.001G119200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9565480-9566479 Populus trichocarpa
Potri.001G119200 1.0kb downstream 1.0kb downstream 1285 true Chr01: 9566480-9567764 Populus trichocarpa
Potri.001G119200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9566765-9567764 Populus trichocarpa
Potri.001G119200 2.0kb upstream 2.0kb upstream 2285 true Chr01: 9564480-9566764 Populus trichocarpa
Potri.001G119200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9564480-9566479 Populus trichocarpa
Potri.001G119200 2.0kb downstream 2.0kb downstream 2285 true Chr01: 9566480-9568764 Populus trichocarpa
Potri.001G119200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9566765-9568764 Populus trichocarpa
Potri.001G119200 5.0kb upstream 5.0kb upstream 5285 true Chr01: 9561480-9566764 Populus trichocarpa
Potri.001G119200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9561480-9566479 Populus trichocarpa
Potri.001G119200 5.0kb downstream 5.0kb downstream 5285 true Chr01: 9566480-9571764 Populus trichocarpa
Potri.001G119200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9566765-9571764 Populus trichocarpa
Potri.001G119200 10.0kb upstream 10.0kb upstream 10285 true Chr01: 9556480-9566764 Populus trichocarpa
Potri.001G119200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9556480-9566479 Populus trichocarpa
Potri.001G119200 10.0kb downstream 10.0kb downstream 10285 true Chr01: 9566480-9576764 Populus trichocarpa
Potri.001G119200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9566765-9576764 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122391927 5262 Malpighiales Singleton cluster - no MSA
124247557 5268 Malvidae View MSA
124037860 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain