Gene : Potri.001G119300 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR31080//PTHR31080:SF8 - FAMILY NOT NAMED // F23N19.12 Genomic Order:  1237
Name:  ? Potri.001G119300 Secondary Identifier:  ? PAC:37279235

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G119300 0.5kb upstream 0.5kb upstream 1663 true Chr01: 9573472-9575134 Populus trichocarpa
Potri.001G119300 0.5kb upstream 0.5kb upstream 500 false Chr01: 9573472-9573971 Populus trichocarpa
Potri.001G119300 0.5kb downstream 0.5kb downstream 1663 true Chr01: 9573972-9575634 Populus trichocarpa
Potri.001G119300 0.5kb downstream 0.5kb downstream 500 false Chr01: 9575135-9575634 Populus trichocarpa
Potri.001G119300 1.0kb upstream 1.0kb upstream 2163 true Chr01: 9572972-9575134 Populus trichocarpa
Potri.001G119300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9572972-9573971 Populus trichocarpa
Potri.001G119300 1.0kb downstream 1.0kb downstream 2163 true Chr01: 9573972-9576134 Populus trichocarpa
Potri.001G119300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9575135-9576134 Populus trichocarpa
Potri.001G119300 2.0kb upstream 2.0kb upstream 3163 true Chr01: 9571972-9575134 Populus trichocarpa
Potri.001G119300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9571972-9573971 Populus trichocarpa
Potri.001G119300 2.0kb downstream 2.0kb downstream 3163 true Chr01: 9573972-9577134 Populus trichocarpa
Potri.001G119300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9575135-9577134 Populus trichocarpa
Potri.001G119300 5.0kb upstream 5.0kb upstream 6163 true Chr01: 9568972-9575134 Populus trichocarpa
Potri.001G119300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9568972-9573971 Populus trichocarpa
Potri.001G119300 5.0kb downstream 5.0kb downstream 6163 true Chr01: 9573972-9580134 Populus trichocarpa
Potri.001G119300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9575135-9580134 Populus trichocarpa
Potri.001G119300 10.0kb upstream 10.0kb upstream 11163 true Chr01: 9563972-9575134 Populus trichocarpa
Potri.001G119300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9563972-9573971 Populus trichocarpa
Potri.001G119300 10.0kb downstream 10.0kb downstream 11163 true Chr01: 9573972-9585134 Populus trichocarpa
Potri.001G119300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9575135-9585134 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460798 5262 Malpighiales View MSA
124251133 5268 Malvidae View MSA
124072666 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain