Gene : Potri.001G101600 P. trichocarpa v3.1
Defline:  (1 of 4) PF13867 - Sin3 binding region of histone deacetylase complex subunit SAP30 (SAP30_Sin3_bdg) Genomic Order:  1056
Name:  ? Potri.001G101600 Secondary Identifier:  ? PAC:37274359
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G101600 0.5kb upstream 0.5kb upstream 5037 true Chr01: 8107738-8112774 Populus trichocarpa
Potri.001G101600 0.5kb upstream 0.5kb upstream 500 false Chr01: 8107738-8108237 Populus trichocarpa
Potri.001G101600 0.5kb downstream 0.5kb downstream 5037 true Chr01: 8108238-8113274 Populus trichocarpa
Potri.001G101600 0.5kb downstream 0.5kb downstream 500 false Chr01: 8112775-8113274 Populus trichocarpa
Potri.001G101600 1.0kb upstream 1.0kb upstream 5537 true Chr01: 8107238-8112774 Populus trichocarpa
Potri.001G101600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8107238-8108237 Populus trichocarpa
Potri.001G101600 1.0kb downstream 1.0kb downstream 5537 true Chr01: 8108238-8113774 Populus trichocarpa
Potri.001G101600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8112775-8113774 Populus trichocarpa
Potri.001G101600 2.0kb upstream 2.0kb upstream 6537 true Chr01: 8106238-8112774 Populus trichocarpa
Potri.001G101600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8106238-8108237 Populus trichocarpa
Potri.001G101600 2.0kb downstream 2.0kb downstream 6537 true Chr01: 8108238-8114774 Populus trichocarpa
Potri.001G101600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8112775-8114774 Populus trichocarpa
Potri.001G101600 5.0kb upstream 5.0kb upstream 9537 true Chr01: 8103238-8112774 Populus trichocarpa
Potri.001G101600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8103238-8108237 Populus trichocarpa
Potri.001G101600 5.0kb downstream 5.0kb downstream 9537 true Chr01: 8108238-8117774 Populus trichocarpa
Potri.001G101600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8112775-8117774 Populus trichocarpa
Potri.001G101600 10.0kb upstream 10.0kb upstream 14537 true Chr01: 8098238-8112774 Populus trichocarpa
Potri.001G101600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8098238-8108237 Populus trichocarpa
Potri.001G101600 10.0kb downstream 10.0kb downstream 14537 true Chr01: 8108238-8122774 Populus trichocarpa
Potri.001G101600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8112775-8122774 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453374 5262 Malpighiales View MSA
124245950 5268 Malvidae View MSA
124072143 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain